Evidence map›Paper›PMID 35768464›Full record

ArticleNPJ genomic medicine2022

Methylome-wide analysis of IVF neonates that underwent embryo culture in different media revealed no significant differences.

Rebekka M Koeck, Florence Busato, Jorg Tost, Dimitri Consten, Jannie van Echten-Arends, Sebastiaan Mastenbroek, Yvonne Wurth, Sylvie Remy, Sabine Langie, Tim S Nawrot and 9 more

Abstract read
In one paragraph

Article in NPJ genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
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  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Rebekka M KoeckDepartment of Clinical Genetics, Maastricht University Medical Centre+, Maastricht, The Netherlands.ORCID http://orcid.org/0000-0001-5852-5633
Florence BusatoLaboratory for Epigenetics & Environment, Centre National de Recherche en Genomique Humaine, CEA - institut de Biologie François Jacob, Université Paris Saclay, 91000, Evry, France.
Jorg TostLaboratory for Epigenetics & Environment, Centre National de Recherche en Genomique Humaine, CEA - institut de Biologie François Jacob, Université Paris Saclay, 91000, Evry, France.
Dimitri ConstenCenter for Reproductive Medicine, St. Elisabeth-TweeSteden Hospital, Hilvarenbeekseweg 60, 5022, GC, Tilburg, the Netherlands.
Jannie van Echten-ArendsSection of Reproductive Medicine, Department of Obstetrics and Gynecology, University Medical Center Groningen, University of Groningen, Hanzeplein 1, 9713, GZ, Groningen, the Netherlands.
Sebastiaan MastenbroekCenter for Reproductive Medicine, Amsterdam Reproduction & Development Research Institute, Amsterdam UMC, University of Amsterdam, Meibergdreef 9, 1105, AZ, Amsterdam, the Netherlands.ORCID http://orcid.org/0000-0002-7550-2924
Yvonne WurthCenter for Reproductive Medicine, St. Elisabeth-TweeSteden Hospital, Hilvarenbeekseweg 60, 5022, GC, Tilburg, the Netherlands.
Sylvie RemyHealth Unit, Flemish Institute for Technological Research (VITO), Boeretang 200, 2400, Mol, Belgium.ORCID http://orcid.org/0000-0003-0322-9620
Sabine LangieHealth Unit, Flemish Institute for Technological Research (VITO), Boeretang 200, 2400, Mol, Belgium.
Tim S NawrotCentre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.
Michelle PlusquinCentre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.
Rossella AlfanoCentre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.ORCID http://orcid.org/0000-0001-9374-4727
Esmée M BijnensCentre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.
Marij GielenDepartment of Epidemiology and Nutrition and Toxicology Research Institute Maastricht (NUTRIM), Maastricht University Medical Centre, Maastricht, the Netherlands.
Ron van GoldeDepartment of Obstetrics and Gynaecology, GROW School for Oncology and Reproduction, Maastricht University Medical Center+, Maastricht, The Netherlands.
John C M DumoulinDepartment of Obstetrics and Gynaecology, GROW School for Oncology and Reproduction, Maastricht University Medical Center+, Maastricht, The Netherlands.
Han BrunnerDepartment of Clinical Genetics, Maastricht University Medical Centre+, Maastricht, The Netherlands.
Aafke P A van MontfoortDepartment of Obstetrics and Gynaecology, GROW School for Oncology and Reproduction, Maastricht University Medical Center+, Maastricht, The Netherlands. aafke.van.montfoort@mumc.nl.
Masoud Zamani EstekiDepartment of Clinical Genetics, Maastricht University Medical Centre+, Maastricht, The Netherlands. masoud.zamaniesteki@mumc.nl.

Funding

March of Dimes Foundation (March of Dimes) 6-FY13-153
6 · The paper itself

Abstract

A growing number of children born are conceived through in vitro fertilisation (IVF), which has been linked to an increased risk of adverse perinatal outcomes, as well as altered growth profiles and cardiometabolic differences in the resultant individuals. Some of these outcomes have also been shown to be influenced by the use of different IVF culture media and this effect is hypothesised to be mediated epigenetically, e.g. through the methylome. As such, we profiled the umbilical cord blood methylome of IVF neonates that underwent preimplantation embryo development in two different IVF culture media (G5 or HTF), using the Infinium Human Methylation EPIC BeadChip. We found no significant methylation differences between the two groups in terms of: (i) systematic differences at CpG sites or regions, (ii) imprinted sites/genes or birth weight-associated sites, (iii) stochastic differences presenting as DNA methylation outliers or differentially variable sites, and (iv) epigenetic gestational age acceleration.

Identifiers

PMID35768464
PMCPMC9243125

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.