Evidence map›Paper›PMID 35765598›Full record

ArticleGastro hep advances2022

Severe Acute Respiratory Syndrome Coronavirus 2 Is Detected in the Gastrointestinal Tract of Asymptomatic Endoscopy Patients but Is Unlikely to Pose a Significant Risk to Healthcare Personnel.

Michelle D Cherne, Andrew B Gentry, Anna Nemudraia, Artem Nemudryi, Jodi F Hedges, Heather Walk, Karlin Blackwell, Deann T Snyder, Maria Jerome, Wyatt Madden and 7 more

Open access · goldAbstract read
In one paragraph

Article in Gastro hep advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. The role ofHeliyon · 2024
    Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Michelle D CherneDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Andrew B GentryDepartment of Gastroenterology, Bozeman Health Deaconess Hospital, Bozeman, Montana.
Anna NemudraiaDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Artem NemudryiDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Jodi F HedgesDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Heather WalkDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Karlin BlackwellDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Deann T SnyderDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Maria JeromeDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Wyatt MaddenDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Marziah HashimiDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
T Andrew SebrellDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
David B KingDepartment of Clinical Research, Bozeman Health Deaconess Hospital, Bozeman, Montana.
Raina K PlowrightDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Mark A JutilaDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Blake WiedenheftDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Diane BimczokDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana.
Montana State University · USBozeman Health Deaconess Hospital · USEmory University · US

Funding

Using the GoFlowChip to understand SARS-CoV-2 infection of the gastrointestinal mucosa of humans and batsU01EB029242 · NIBIB · MONTANA STATE UNIVERSITY - BOZEMAN · PI BIMCZOK, DIANE, WALK, SETH T · 2019 to 2023
$4.0M
Structural and functional understanding of bacterial defense and viral counter defenseR35GM134867 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Blake A Wiedenheft · 2020 to 2026
$3.8M
NIBIB NIH HHS U01 EB029242NIGMS NIH HHS R35 GM134867
6 · The paper itself

Abstract

Background and Aims: Recent evidence suggests that the gut is an additional target for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection. However, whether SARS-CoV-2 spreads via gastrointestinal secretions remains unclear. To determine the prevalence of gastrointestinal SARS-CoV-2 infection in asymptomatic subjects, we analyzed gastrointestinal biopsy and liquid samples from endoscopy patients for the presence of SARS-CoV-2. Methods: We enrolled 100 endoscopic patients without known SARS-CoV-2 infection (cohort A) and 12 patients with a previous COVID-19 diagnosis (cohort B) in a cohort study performed at a regional hospital. Gastrointestinal biopsies and fluids were screened for SARS-CoV-2 by polymerase chain reaction (PCR), immunohistochemistry, and virus isolation assay, and the stability of SARS-CoV-2 in gastrointestinal liquids in vitro was analyzed. Results: SARS-CoV-2 ribonucleic acid was detected by PCR in the colonic tissue of 1/100 patients in cohort A. In cohort B, 3 colonic liquid samples tested positive for SARS-CoV-2 by PCR and viral nucleocapsid protein was detected in the epithelium of the respective biopsy samples. However, no infectious virions were recovered from any samples. In vitro exposure of SARS-CoV-2 to colonic liquid led to a 4-log-fold reduction of infectious SARS-CoV-2 within 1 hour ( Conclusion: Overall, the persistent detection of SARS-CoV-2 in endoscopy samples after resolution of COVID-19 points to the gut as a long-term reservoir for SARS-CoV-2. Since no infectious virions were recovered and SARS-CoV-2 was rapidly inactivated in the presence of colon liquids, it is unlikely that performing endoscopic procedures is associated with a significant infection risk due to undiagnosed asymptomatic or persistent gastrointestinal SARS-CoV-2 infections.

Indexed as

Colonic LiquidCOVID-19, coronavirus disease 2019E gene, envelope geneEndoscopyGI, gastrointestinalN gene, nucleocapsid geneNP, nucleocapsid proteinPFU, plaque-forming unitsqRT-PCR, quantitative reverse transcription polymerase chain reactionSARS-CoV-2SARS-CoV-2, severe acute respiratory syndrome coronavirus 2Transmission Risk

Identifiers

PMID35765598
PMCPMC9225937
OpenAlexW4283367537

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.