Evidence map›Paper›PMID 35765185›Full record

ArticleMicrobiologyOpen2022

Identification of novel arsenic resistance genes in yeast.

Esin Isik, Çiğdem Balkan, Vivien Karl, Hüseyin Çağlar Karakaya, Sansan Hua, Sebastien Rauch, Markus J Tamás, Ahmet Koc

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Esin IsikDepartment of Molecular Biology and Genetics, Izmir Institute of Technology, Izmir, Turkey.
Çiğdem BalkanDepartment of Molecular Biology and Genetics, Izmir Institute of Technology, Izmir, Turkey.
Vivien KarlDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Hüseyin Çağlar KarakayaDepartment of Molecular Biology and Genetics, Izmir Institute of Technology, Izmir, Turkey.
Sansan HuaDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Sebastien RauchWater Environment Technology, Department of Architecture and Civil Engineering, Chalmers University of Technology, Gothenburg, Sweden.
Markus J TamásDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Ahmet KocDepartment of Molecular Biology and Genetics, Izmir Institute of Technology, Izmir, Turkey.
Izmir Institute of Technology · TRUniversity of Gothenburg · SEChalmers University of Technology · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arsenic is a toxic metalloid that affects human health by causing numerous diseases and by being used in the treatment of acute promyelocytic leukemia. Saccharomyces cerevisiae (budding yeast) has been extensively utilized to elucidate the molecular mechanisms underlying arsenic toxicity and resistance in eukaryotes. In this study, we applied a genomic DNA overexpression strategy to identify yeast genes that provide arsenic resistance in wild-type and arsenic-sensitive S. cerevisiae cells. In addition to known arsenic-related genes, our genetic screen revealed novel genes, including PHO86, VBA3, UGP1, and TUL1, whose overexpression conferred resistance. To gain insights into possible resistance mechanisms, we addressed the contribution of these genes to cell growth, intracellular arsenic, and protein aggregation during arsenate exposure. Overexpression of PHO86 resulted in higher cellular arsenic levels but no additional effect on protein aggregation, indicating that these cells efficiently protect their intracellular environment. VBA3 overexpression caused resistance despite higher intracellular arsenic and protein aggregation levels. Overexpression of UGP1 led to lower intracellular arsenic and protein aggregation levels while TUL1 overexpression had no impact on intracellular arsenic or protein aggregation levels. Thus, the identified genes appear to confer arsenic resistance through distinct mechanisms but the molecular details remain to be elucidated.

Indexed as

ArsenicSaccharomyces cerevisiae ProteinsHumansProtein AggregatesSaccharomyces cerevisiaeArsenicProtein AggregatesSaccharomyces cerevisiae ProteinsarsenatearsenitePho86Tul1Ugp1Vba3

Identifiers

PMID35765185
PMCPMC9055376
OpenAlexW4226077865

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.