Evidence map›Paper›PMID 35764676›Full record

ArticleThe ISME journal2022

Seasonality of parasitic and saprotrophic zoosporic fungi: linking sequence data to ecological traits.

Silke Van den Wyngaert, Lars Ganzert, Kensuke Seto, Keilor Rojas-Jimenez, Ramsy Agha, Stella A Berger, Jason Woodhouse, Judit Padisak, Christian Wurzbacher, Maiko Kagami and 1 more

Abstract read
In one paragraph

Article in The ISME journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
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  4. Fungal parasites infecting NNature communications · 2026
    Article
  5. Article
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  16. Review
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  18. Article
  19. Review
  20. Fungal systematics and evolution · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Silke Van den WyngaertDepartment of Plankton and Microbial Ecology, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Zur alten Fischerhütte 2, 16775, Stechlin, Germany. silke.vandenwyngaert@utu.fi.ORCID http://orcid.org/0000-0001-9163-4858
Lars GanzertDepartment of Plankton and Microbial Ecology, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Zur alten Fischerhütte 2, 16775, Stechlin, Germany.ORCID http://orcid.org/0000-0001-9595-1041
Kensuke SetoFaculty of Environment and Information Sciences, Yokohama National University, Tokiwadai 79-7, Hodogayaku, Yokohama, Kanagawa, 240-8501, Japan.
Keilor Rojas-JimenezEscuela de Biología, Universidad de Costa Rica, 11501, San José, Costa Rica.ORCID http://orcid.org/0000-0003-4261-0010
Ramsy AghaDepartment of Ecosystem Research, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Müggelseedamm 301, 12587, Berlin, Germany.ORCID http://orcid.org/0000-0002-6109-4624
Stella A BergerDepartment of Plankton and Microbial Ecology, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Zur alten Fischerhütte 2, 16775, Stechlin, Germany.ORCID http://orcid.org/0000-0002-8835-545X
Jason WoodhouseDepartment of Plankton and Microbial Ecology, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Zur alten Fischerhütte 2, 16775, Stechlin, Germany.
Judit PadisakResearch Group of Limnology, Centre of Natural Sciences, University of Pannonia, Egyetem u. 10, 8200, Veszprém, Hungary.ORCID http://orcid.org/0000-0001-8285-2896
Christian WurzbacherChair of Urban Water Systems Engineering, Technical University of Munich, Am Coulombwall 3, 85748, Garching, Germany.
Maiko KagamiFaculty of Environment and Information Sciences, Yokohama National University, Tokiwadai 79-7, Hodogayaku, Yokohama, Kanagawa, 240-8501, Japan. kagami-maiko-bd@ynu.ac.jp.ORCID http://orcid.org/0000-0003-3086-390X
Hans-Peter GrossartDepartment of Plankton and Microbial Ecology, Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Zur alten Fischerhütte 2, 16775, Stechlin, Germany. hgrossart@igb-berlin.de.ORCID http://orcid.org/0000-0002-9141-0325

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) AG 284/1-1Deutsche Forschungsgemeinschaft (German Research Foundation) GR1540/30-1Deutsche Forschungsgemeinschaft (German Research Foundation) WU 890/2-1Deutsche Forschungsgemeinschaft (German Research Foundation) WY175/1-1
6 · The paper itself

Abstract

Zoosporic fungi of the phylum Chytridiomycota (chytrids) regularly dominate pelagic fungal communities in freshwater and marine environments. Their lifestyles range from obligate parasites to saprophytes. Yet, linking the scarce available sequence data to specific ecological traits or their host ranges constitutes currently a major challenge. We combined 28 S rRNA gene amplicon sequencing with targeted isolation and sequencing approaches, along with cross-infection assays and analysis of chytrid infection prevalence to obtain new insights into chytrid diversity, ecology, and seasonal dynamics in a temperate lake. Parasitic phytoplankton-chytrid and saprotrophic pollen-chytrid interactions made up the majority of zoosporic fungal reads. We explicitly demonstrate the recurrent dominance of parasitic chytrids during frequent diatom blooms and saprotrophic chytrids during pollen rains. Distinct temporal dynamics of diatom-specific parasitic clades suggest mechanisms of coexistence based on niche differentiation and competitive strategies. The molecular and ecological information on chytrids generated in this study will aid further exploration of their spatial and temporal distribution patterns worldwide. To fully exploit the power of environmental sequencing for studies on chytrid ecology and evolution, we emphasize the need to intensify current isolation efforts of chytrids and integrate taxonomic and autecological data into long-term studies and experiments.

Indexed as

ChytridiomycotaDiatomsParasitesAnimalsFungiLakesPhytoplankton

Identifiers

PMID35764676
PMCPMC9381765

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.