Evidence map›Paper›PMID 35764090›Full record

ArticleCell2022

Microbial liberation of N-methylserotonin from orange fiber in gnotobiotic mice and humans.

Nathan D Han, Jiye Cheng, Omar Delannoy-Bruno, Daniel Webber, Nicolas Terrapon, Bernard Henrissat, Dmitry A Rodionov, Aleksandr A Arzamasov, Andrei L Osterman, David K Hayashi and 7 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 64 citations in OpenAlex.

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  16. IUCrData · 2023
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  19. Microbial Metabolites as Ligands to Xenobiotic Receptors: Chemical Mimicry as Potential Drugs of the Future.Drug metabolism and disposition: the biological fate of chemicals · 2023
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 3 countries.

Nathan D HanThe Edison Family Center for Genome Sciences and Systems Biology, St. Louis, MO 63110, USA; Center for Gut Microbiome and Nutrition Research, St. Louis, MO 63110, USA.
Jiye ChengThe Edison Family Center for Genome Sciences and Systems Biology, St. Louis, MO 63110, USA; Center for Gut Microbiome and Nutrition Research, St. Louis, MO 63110, USA.
Omar Delannoy-BrunoThe Edison Family Center for Genome Sciences and Systems Biology, St. Louis, MO 63110, USA; Center for Gut Microbiome and Nutrition Research, St. Louis, MO 63110, USA.
Daniel WebberThe Edison Family Center for Genome Sciences and Systems Biology, St. Louis, MO 63110, USA; Center for Gut Microbiome and Nutrition Research, St. Louis, MO 63110, USA; Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Nicolas TerraponArchitecture et Fonction des Macromolécules Biologiques, CNRS, Aix-Marseille University, 13288 Marseille, France.
Bernard HenrissatArchitecture et Fonction des Macromolécules Biologiques, CNRS, Aix-Marseille University, 13288 Marseille, France; Department of Biotechnology and Biomedicine (DTU Bioengineering), Technical University of Denmark, 2800 Kgs. Lyngby, Denmark.
Dmitry A RodionovInfectious and Inflammatory Disease Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA 92037, USA.
Aleksandr A ArzamasovInfectious and Inflammatory Disease Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA 92037, USA.
Andrei L OstermanInfectious and Inflammatory Disease Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA 92037, USA.
David K HayashiMondelēz Global LLC, Chicago, IL 60607, USA.
Alexandra MeynierMondelēz Global LLC, Chicago, IL 60607, USA.
Sophie VinoyMondelēz Global LLC, Chicago, IL 60607, USA.
Chandani DesaiThe Edison Family Center for Genome Sciences and Systems Biology, St. Louis, MO 63110, USA; Center for Gut Microbiome and Nutrition Research, St. Louis, MO 63110, USA.
Stacey MarionDepartment of Psychiatry, Washington University School of Medicine, St. Louis, MO 63110, USA.
Michael J BarrattThe Edison Family Center for Genome Sciences and Systems Biology, St. Louis, MO 63110, USA; Center for Gut Microbiome and Nutrition Research, St. Louis, MO 63110, USA; Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Andrew C HeathDepartment of Psychiatry, Washington University School of Medicine, St. Louis, MO 63110, USA.
Jeffrey I GordonThe Edison Family Center for Genome Sciences and Systems Biology, St. Louis, MO 63110, USA; Center for Gut Microbiome and Nutrition Research, St. Louis, MO 63110, USA. Electronic address: jgordon@wustl.edu.
Washington University in St. Louis · USMondelēz International (United States) · USSanford Burnham Prebys Medical Discovery Institute · USAix-Marseille Université · FRArchitecture et Fonction des Macromolécules Biologiques · FR

Funding

GUT MICROBIOTA AND OBESITY: STUDIES IN GNOTOBIOTIC MICER01DK070977 · NIDDK · WASHINGTON UNIVERSITY · PI GORDON, JEFFREY I, HETTICH, ROBERT L. · 2005 to 2020
$6.3M
NIDDK NIH HHS R01 DK070977
6 · The paper itself

Abstract

Plant fibers in byproduct streams produced by non-harsh food processing methods represent biorepositories of diverse, naturally occurring, and physiologically active biomolecules. To demonstrate one approach for their characterization, mass spectrometry of intestinal contents from gnotobiotic mice, plus in vitro studies, revealed liberation of N-methylserotonin from orange fibers by human gut microbiota members including Bacteroides ovatus. Functional genomic analyses of B. ovatus strains grown under permissive and non-permissive N-methylserotonin "mining" conditions revealed polysaccharide utilization loci that target pectins whose expression correlate with strain-specific liberation of this compound. N-methylserotonin, orally administered to germ-free mice, reduced adiposity, altered liver glycogenesis, shortened gut transit time, and changed expression of genes that regulate circadian rhythm in the liver and colon. In human studies, dose-dependent, orange-fiber-specific fecal accumulation of N-methylserotonin positively correlated with levels of microbiome genes encoding enzymes that digest pectic glycans. Identifying this type of microbial mining activity has potential therapeutic implications.

Indexed as

Citrus sinensisGastrointestinal MicrobiomeAnimalsDietary FiberGerm-Free LifeHumansMicePectinsPolysaccharidesSerotoninDietary FiberN-methylserotoninPectinsPolysaccharidesSerotoninbyproducts of food manufacturingcarbohydrate-active enzymesdietary fibersgnotobiotic micemicrobiota-mediated metabolite liberationN-methylserotonin

Identifiers

PMID35764090
PMCPMC9271604
OpenAlexW4283580522

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.