Evidence map›Paper›PMID 35762974›Full record

ArticleBioinformatics (Oxford, England)2022

Outlier detection for multi-network data.

Pritam Dey, Zhengwu Zhang, David B Dunson

Open access · greenAbstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 0 citations in OpenAlex.

  1. Article
  2. Hypothesis testing for detecting outlier evaluators.The international journal of biostatistics · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Pritam DeyDepartment of Statistical Science, Duke University, Durham, NC 27708, USA.ORCID 0000-0002-0323-4991
Zhengwu ZhangDepartment of Statistics and Operations Research, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
David B DunsonDepartment of Statistical Science, Duke University, Durham, NC 27708, USA.
Duke University · USUniversity of North Carolina at Chapel Hill · US

Funding

CRCNS: Geometry-based Brain Connectome AnalysisR01MH118927 · NIMH · DUKE UNIVERSITY · PI DUNSON, DAVID BRIAN, ZHANG, ZHENGWU · 2018 to 2020
$945k
Advancing methods for structural connectome acquisition and estimation in older adultsR21AG066970 · NIA · UNIVERSITY OF ROCHESTER · PI HEFFNER, KATHI L, LIN, FENG VANKEE · 2020 to 2020
$438k
Medical Research Council MC_PC_17228Medical Research Council MC_QA137853NIA NIH HHS R21 AG066970NIMH NIH HHS R01 MH118927
6 · The paper itself

Abstract

motivationIt has become routine in neuroscience studies to measure brain networks for different individuals using neuroimaging. These networks are typically expressed as adjacency matrices, with each cell containing a summary of connectivity between a pair of brain regions. There is an emerging statistical literature describing methods for the analysis of such multi-network data in which nodes are common across networks but the edges vary. However, there has been essentially no consideration of the important problem of outlier detection. In particular, for certain subjects, the neuroimaging data are so poor quality that the network cannot be reliably reconstructed. For such subjects, the resulting adjacency matrix may be mostly zero or exhibit a bizarre pattern not consistent with a functioning brain. These outlying networks may serve as influential points, contaminating subsequent statistical analyses. We propose a simple Outlier DetectIon for Networks (ODIN) method relying on an influence measure under a hierarchical generalized linear model for the adjacency matrices. An efficient computational algorithm is described, and ODIN is illustrated through simulations and an application to data from the UK Biobank.

resultsODIN was successful in identifying moderate to extreme outliers. Removing such outliers can significantly change inferences in downstream applications. AVAILABILITY AND IMPLEMENTATION: ODIN has been implemented in both Python and R and these implementations along with other code are publicly available at github.com/pritamdey/ODIN-python and github.com/pritamdey/ODIN-r, respectively. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Indexed as

AlgorithmsNeuroimagingBrainHumansSoftware

Identifiers

PMID35762974
PMCPMC9890313
OpenAlexW4280624008

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.