Evidence map›Paper›PMID 35762708›Full record

ArticleProtein science : a publication of the Protein Society2022

Identification of 121 variants of honey bee Vitellogenin protein sequences with structural differences at functional sites.

Vilde Leipart, Jane Ludvigsen, Matthew Kent, Simen Sandve, Thu-Hien To, Mariann Árnyasi, Claus D Kreibich, Bjørn Dahle, Gro V Amdam

Open access · hybridAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

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  5. Genomic signatures associated with the evolutionary loss of egg yolk in parasitoid wasps.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Vilde LeipartFaculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway.ORCID 0000-0002-5740-6760
Jane LudvigsenFaculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway.
Matthew KentDepartment of Animal and Aquacultural Sciences, Centre for Integrative Genetics (CIGENE), Norwegian University of Life Sciences, Ås, Norway.
Simen SandveDepartment of Animal and Aquacultural Sciences, Centre for Integrative Genetics (CIGENE), Norwegian University of Life Sciences, Ås, Norway.
Thu-Hien ToDepartment of Animal and Aquacultural Sciences, Centre for Integrative Genetics (CIGENE), Norwegian University of Life Sciences, Ås, Norway.
Mariann ÁrnyasiDepartment of Animal and Aquacultural Sciences, Centre for Integrative Genetics (CIGENE), Norwegian University of Life Sciences, Ås, Norway.
Claus D KreibichFaculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway.
Bjørn DahleFaculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway.
Gro V AmdamFaculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway.
Norwegian University of Life Sciences · NONorwegian Beekeepers Association · NOSkedsmo Medisinske Senter · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins are under selection to maintain central functions and to accommodate needs that arise in ever-changing environments. The positive selection and neutral drift that preserve functions result in a diversity of protein variants. The amount of diversity differs between proteins: multifunctional or disease-related proteins tend to have fewer variants than proteins involved in some aspects of immunity. Our work focuses on the extensively studied protein Vitellogenin (Vg), which in honey bees (Apis mellifera) is multifunctional and highly expressed and plays roles in immunity. Yet, almost nothing is known about the natural variation in the coding sequences of this protein or how amino acid-altering variants might impact structure-function relationships. Here, we map out allelic variation in honey bee Vg using biological samples from 15 countries. The successful barcoded amplicon Nanopore sequencing of 543 bees revealed 121 protein variants, indicating a high level of diversity in Vg. We find that the distribution of non-synonymous single nucleotide polymorphisms (nsSNPs) differs between protein regions with different functions; domains involved in DNA and protein-protein interactions contain fewer nsSNPs than the protein's lipid binding cavities. We outline how the central functions of the protein can be maintained in different variants and how the variation pattern may inform about selection from pathogens and nutrition.

Indexed as

VitellogeninsAmino Acid SequenceAnimalsBeesVitellogeninshoney beelong-range amplicon sequencingprotein variantsVitellogenin

Identifiers

PMID35762708
PMCPMC9207902
OpenAlexW4283160979

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.