Evidence map›Paper›PMID 35762422›Full record

ArticleThe EMBO journal2022

A heterotypic assembly mechanism regulates CHIP E3 ligase activity.

Aniruddha Das, Pankaj Thapa, Ulises Santiago, Nilesh Shanmugam, Katarzyna Banasiak, Katarzyna Dąbrowska, Hendrik Nolte, Natalia A Szulc, Rose M Gathungu, Dominik Cysewski and 6 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Posttranslational Regulation of Mammalian Sulfur Amino Acid Metabolism.International journal of molecular sciences · 2025
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

Aniruddha DasLaboratory of Protein Metabolism, International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.ORCID 0000-0002-7704-3573
Pankaj ThapaLaboratory of Protein Metabolism, International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.ORCID 0000-0001-5536-1768
Ulises SantiagoDepartment of Computational and Systems Biology, University of Pittsburgh, Pittsburgh, PA, USA.ORCID 0000-0003-2259-5984
Nilesh ShanmugamLaboratory of Protein Metabolism, International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.ORCID 0000-0002-6813-115X
Katarzyna BanasiakLaboratory of Protein Metabolism, International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.ORCID 0000-0002-1027-9426
Katarzyna DąbrowskaInstitute of Biochemistry and Biophysics, PAS, Warsaw, Poland.ORCID 0000-0001-7833-0374
Hendrik NolteInstitute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany.ORCID 0000-0003-1560-5099
Natalia A SzulcLaboratory of Protein Metabolism, International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.ORCID 0000-0002-2991-3634
Rose M GathunguMetabolomics Core Facility, EMBL, Heidelberg, Germany.ORCID 0000-0002-5552-2565
Dominik CysewskiInstitute of Biochemistry and Biophysics, PAS, Warsaw, Poland.ORCID 0000-0001-6206-0672
Marcus KrügerInstitute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany.ORCID 0000-0002-5846-6941
Michał DadlezInstitute of Biochemistry and Biophysics, PAS, Warsaw, Poland.ORCID 0000-0001-8811-5176
Marcin NowotnyLaboratory of Protein Structure, International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.ORCID 0000-0001-8632-0977
Carlos J CamachoDepartment of Computational and Systems Biology, University of Pittsburgh, Pittsburgh, PA, USA.ORCID 0000-0003-1741-8529
Thorsten HoppeInstitute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany.ORCID 0000-0002-4734-9352
Wojciech PokrzywaLaboratory of Protein Metabolism, International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.ORCID 0000-0002-5110-4462
International Institute of Molecular and Cell Biology · PLInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PLUniversity of Cologne · DEUniversity of Pittsburgh · USEuropean Molecular Biology Organization · DE

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Real-time discovery of inhibitors among billion compounds for preview and downloadR01GM097082 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CAMACHO, CARLOS J. · 2011 to 2020
$2.5M
NIGMS NIH HHS R01 GM097082NIH HHS P40 OD010440
6 · The paper itself

Abstract

CHIP (C-terminus of Hsc70-interacting protein) and its worm ortholog CHN-1 are E3 ubiquitin ligases that link the chaperone system with the ubiquitin-proteasome system (UPS). CHN-1 can cooperate with UFD-2, another E3 ligase, to accelerate ubiquitin chain formation; however, the basis for the high processivity of this E3s set has remained obscure. Here, we studied the molecular mechanism and function of the CHN-1-UFD-2 complex in Caenorhabditis elegans. Our data show that UFD-2 binding promotes the cooperation between CHN-1 and ubiquitin-conjugating E2 enzymes by stabilizing the CHN-1 U-box dimer. However, HSP70/HSP-1 chaperone outcompetes UFD-2 for CHN-1 binding, thereby promoting a shift to the autoinhibited CHN-1 state by acting on a conserved residue in its U-box domain. The interaction with UFD-2 enables CHN-1 to efficiently ubiquitylate and regulate S-adenosylhomocysteinase (AHCY-1), a key enzyme in the S-adenosylmethionine (SAM) regeneration cycle, which is essential for SAM-dependent methylation. Our results define the molecular mechanism underlying the synergistic cooperation of CHN-1 and UFD-2 in substrate ubiquitylation.

Indexed as

Caenorhabditis elegans ProteinsUbiquitinAnimalsCaenorhabditis elegansHSP70 Heat-Shock ProteinsMolecular ChaperonesUbiquitinationUbiquitin-Conjugating EnzymesUbiquitin-Protein LigasesCaenorhabditis elegans ProteinsHSP-1 protein, C elegansHSP70 Heat-Shock ProteinsMolecular ChaperonesUbiquitinUbiquitin-Conjugating EnzymesUbiquitin-Protein LigasesC. elegansCHIP/STUB1/CHN-1metabolismubiquitin ligaseUFD-2

Identifiers

PMID35762422
PMCPMC9340540
OpenAlexW4283652825

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.