ArticleBMC genomics2022
Transcriptomic analysis of tuberous root in two sweet potato varieties reveals the important genes and regulatory pathways in tuberous root development.
Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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15 citing papers in PubMed, 33 citations in OpenAlex.
- The Influencing Factors of In Vitro Regeneration and Bulblet Enlargement of Two PloidyPlants (Basel, Switzerland) · 2026Article
- Reducing nitrogen with dense planting increase sweetpotato storage roots quantity via favoring starch synthesis over lignification.iScience · 2026Article
- Transcriptome profiling of Rehmannia glutinosa uncovers ABA/GA antagonism mechanisms in tuberous root initiation.Functional & integrative genomics · 2026Article
- Integrated transcriptomic and metabolomic analyses reveal the molecular mechanisms of sugar accumulation and yield trade-off in sugar beet.Frontiers in plant science · 2026Article
- The potential role of short internodes/stylish (SHI/STY) and SHI related sequence (SRS) in potato tuberization.BMC plant biology · 2025Article
- Article
- Transcriptional landscape of sweetpotato root tip development at the single-cell level.BMC plant biology · 2024Article
- Morphological, anatomical, and transcriptomics analysis reveals the regulatory mechanisms of cassava plant height development.BMC genomics · 2024Article
- Transcriptome Analysis Reveals Novel Genes Potentially Involved in Tuberization in Potato.Plants (Basel, Switzerland) · 2024Article
- A comprehensive overview of omics-based approaches to enhance biotic and abiotic stress tolerance in sweet potato.Horticulture research · 2024Article
- Transcriptome-Based WGCNA Analysis Reveals the Mechanism of Drought Resistance Differences in Sweetpotato (International journal of molecular sciences · 2023Article
- Transcriptome profiling reveals the genes involved in tuberous root expansion in Pueraria (Pueraria montana var. thomsonii).BMC plant biology · 2023Article
- The Expression of the StNRAMP2 Gene Determined the Accumulation of Cadmium in Different Tissues of Potato.International journal of molecular sciences · 2023Article
- Influence of Planting Density on Sweet Potato Storage Root Formation by Regulating Carbohydrate and Lignin Metabolism.Plants (Basel, Switzerland) · 2023Article
- Form and contour: breeding and genetics of organ shape from wild relatives to modern vegetable crops.Frontiers in plant science · 2023Review
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Authors and funding
12 authors at 3 institutions in 1 country.
Funding
Abstract
backgroundTuberous root formation and development is a complex process in sweet potato, which is regulated by multiple genes and environmental factors. However, the regulatory mechanism of tuberous root development is unclear.
resultsIn this study, the transcriptome of fibrous roots (R0) and tuberous roots in three developmental stages (Rl, R2, R3) were analyzed in two sweet potato varieties, GJS-8 and XGH. A total of 22,914 and 24,446 differentially expressed genes (DEGs) were identified in GJS-8 and XGH respectively, 15,920 differential genes were shared by GJS-8 and XGH. KEGG pathway enrichment analysis showed that the DEGs shared by GJS-8 and XGH were mainly involved in "plant hormone signal transduction" "starch and sucrose metabolism" and "MAPK signal transduction". Trihelix transcription factor (Tai6.25300) was found to be closely related to tuberous root enlargement by the comprehensive analysis of these DEGs and weighted gene co-expression network analysis (WGCNA).
conclusionA hypothetical model of genetic regulatory network for tuberous root development of sweet potato is proposed, which emphasizes that some specific signal transduction pathways like "plant hormone signal transduction" "Ca
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