Evidence map›Paper›PMID 35760977›Full record

ArticleScientific reports2022

Spatial heterogeneity of extensively drug resistant-tuberculosis in Western Cape Province, South Africa.

Karla Therese L Sy, Sarah V Leavitt, Margaretha de Vos, Tania Dolby, Jacob Bor, C Robert Horsburgh, Robin M Warren, Elizabeth M Streicher, Helen E Jenkins, Karen R Jacobson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Karla Therese L SyDepartment of Epidemiology, Boston University School of Public Health, Boston, MA, USA.
Sarah V LeavittDepartment of Biostatistics, Boston University School of Public Health, Boston, MA, USA.
Margaretha de VosDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research/South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
Tania DolbyNational Health Laboratory Service, Cape Town, South Africa.
Jacob BorDepartment of Epidemiology, Boston University School of Public Health, Boston, MA, USA.
C Robert HorsburghDepartment of Epidemiology, Boston University School of Public Health, Boston, MA, USA.
Robin M WarrenDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research/South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
Elizabeth M StreicherDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research/South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
Helen E JenkinsDepartment of Biostatistics, Boston University School of Public Health, Boston, MA, USA.
Karen R JacobsonSection of Infectious Diseases, School of Medicine and Boston Medical Center, Boston University, Boston, MA, USA. kjacobso@bu.edu.
Boston University · USStellenbosch University · ZANational Health Laboratory Service · ZASouth African Medical Research Council · ZA

Funding

Translational ScienceP30AI042853 · NIAID · MIRIAM HOSPITAL · PI CURT G BECKWITH, DEBBIE M. CHENG · 1998 to 2026
$51.7M
Transmission Of Tuberculosis Among illicit drug use Linkages (TOTAL)R01AI147316 · NIAID · BOSTON MEDICAL CENTER · PI JACOBSON, KAREN R · 2019 to 2023
$3.5M
The impact of alcohol consumption on TB treatment outcomesR01AI119037 · NIAID · BOSTON MEDICAL CENTER · PI JACOBSON, KAREN R · 2016 to 2020
$3.3M
Interdisciplinary Training for BiostatisticiansT32GM074905 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI WHITE, LAURA FORSBERG · 2005 to 2019
$3.0M
Evaluating the tuberculosis epidemic in South Africa using a novel ten-year cohortR01AI152126 · NIAID · WITS HEALTH CONSORTIUM (PTY), LTD · PI JENKINS, HELEN E., SCOTT, LESLEY · 2020 to 2024
$1.6M
Geospatial clustering and molecular and social epidemiology of drug resistant TBK01TW009213 · FIC · MASSACHUSETTS GENERAL HOSPITAL · PI JACOBSON, KAREN R · 2011 to 2015
$715k
Understanding spatial heterogeneity of drug resistant tuberculosisK01AI102944 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI JENKINS, HELEN E. · 2013 to 2017
$627k
Tracking drug-resistant tuberculosis patients through time in South AfricaR03AI144335 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI JENKINS, HELEN E. · 2019 to 2020
$165k
FIC NIH HHS K01 TW009213NIAID NIH HHS K01 AI102944NIAID NIH HHS P30 AI042853NIAID NIH HHS R01 AI119037NIAID NIH HHS R01 AI147316NIAID NIH HHS R01 AI152126NIAID NIH HHS R03 AI144335NIGMS NIH HHS T32 GM074905NIH HHS K01AI102944NIH HHS K01TW009213NIH HHS P30AI042853
6 · The paper itself

Abstract

Tuberculosis (TB) remains a leading infectious disease killer globally. Treatment outcomes are especially poor among people with extensively drug-resistant (XDR) TB, until recently defined as rifampicin-resistant (RR) TB with resistance to an aminoglycoside (amikacin) and a fluoroquinolone (ofloxacin). We used laboratory TB test results from Western Cape province, South Africa between 2012 and 2015 to identify XDR-TB and pre-XDR-TB (RR-TB with resistance to one second-line drug) spatial hotspots. We mapped the percentage and count of individuals with RR-TB that had XDR-TB and pre-XDR-TB across the province and in Cape Town, as well as amikacin-resistant and ofloxacin-resistant TB. We found the percentage of pre-XDR-TB and the count of XDR-TB/pre-XDR-TB highly heterogeneous with geographic hotspots within RR-TB high burden areas, and found hotspots in both percentage and count of amikacin-resistant and ofloxacin-resistant TB. The spatial distribution of percentage ofloxacin-resistant TB hotspots was similar to XDR-TB hotspots, suggesting that fluoroquinolone-resistace is often the first step to additional resistance. Our work shows that interventions used to reduce XDR-TB incidence may need to be targeted within spatial locations of RR-TB, and further research is required to understand underlying drivers of XDR-TB transmission in these locations.

Indexed as

Extensively Drug-Resistant TuberculosisMycobacterium tuberculosisTuberculosis, Multidrug-ResistantAmikacinAntitubercular AgentsFluoroquinolonesHumansMicrobial Sensitivity TestsOfloxacinSouth AfricaAmikacinAntitubercular AgentsFluoroquinolonesOfloxacin

Identifiers

PMID35760977
PMCPMC9237070
OpenAlexW4283701224

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.