Evidence map›Paper›PMID 35759575›Full record

ArticleAmerican journal of hematology2022

HERVs characterize normal and leukemia stem cells and represent a source of shared epitopes for cancer immunotherapy.

Vincent Alcazer, Paola Bonaventura, Laurie Tonon, Emilie Michel, Virginie Mutez, Clémentine Fabres, Nicolas Chuvin, Rasha Boulos, Yann Estornes, Véronique Maguer-Satta and 8 more

Open access · hybridAbstract read
In one paragraph

Article in American journal of hematology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 25 citations in OpenAlex.

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  13. Cancer Vaccines: Recent Insights and Future Directions.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 4 countries.

Vincent AlcazerDepartment of Hematology, Hospices Civils de Lyon, Lyon Sud Hospital, Pierre-Bénite, France.ORCID 0000-0003-1843-6286
Paola BonaventuraCancer Research Center of Lyon, INSERM U1052 and CNRS UMR5286, Lyon, France.
Laurie TononSynergie Lyon Cancer Foundation, Gilles Thomas Bioinformatics Center, Centre Léon Bérard, Lyon, France.
Emilie MichelErvaccine Technologies, Centre Leon Bérard, Lyon, France.
Virginie MutezErvaccine Technologies, Centre Leon Bérard, Lyon, France.
Clémentine FabresCancer Research Center of Lyon, INSERM U1052 and CNRS UMR5286, Lyon, France.
Nicolas ChuvinErvaccine Technologies, Centre Leon Bérard, Lyon, France.ORCID 0000-0002-2138-2330
Rasha BoulosErvaccine Technologies, Centre Leon Bérard, Lyon, France.ORCID 0000-0003-1607-2394
Yann EstornesErvaccine Technologies, Centre Leon Bérard, Lyon, France.ORCID 0000-0003-2687-290X
Véronique Maguer-SattaCancer Research Center of Lyon, INSERM U1052 and CNRS UMR5286, Lyon, France.
Kevin GeistlichCancer Research Center of Lyon, INSERM U1052 and CNRS UMR5286, Lyon, France.
Alain ViariSynergie Lyon Cancer Foundation, Gilles Thomas Bioinformatics Center, Centre Léon Bérard, Lyon, France.
Klaus H MetzelerLaboratory for Leukemia Diagnostics, Department of Medicine III, University Hospital, LMU Munich, Munich, Germany.
Wolfgang HiddemannErvaccine Technologies, Centre Leon Bérard, Lyon, France.
Aarif M N BatchInstitute of Medical Data Processing, Biometrics and Epidemiology (IBE), Faculty of Medicine, LMU Munich, Munich, Germany.
Tobias HeroldLaboratory for Leukemia Diagnostics, Department of Medicine III, University Hospital, LMU Munich, Munich, Germany.
Christophe CauxCancer Research Center of Lyon, INSERM U1052 and CNRS UMR5286, Lyon, France.
Stéphane DepilCancer Research Center of Lyon, INSERM U1052 and CNRS UMR5286, Lyon, France.
Centre Léon Bérard · FRUniversité Claude Bernard Lyon 1 · FRLeipzig University of Applied Sciences · DELMU Klinikum · DEZimmer Biomet (Netherlands) · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human endogenous retroviruses (HERVs) represent 8% of the human genome. The expression of HERVs and their immune impact have not been extensively studied in Acute Myeloid Leukemia (AML). In this study, we used a reference of 14 968 HERV functional units to provide a thorough analysis of HERV expression in normal and AML bone marrow cells. We show that the HERV retrotranscriptome accurately characterizes normal and leukemic cell subpopulations, including leukemia stem cells, in line with different epigenetic profiles. We then show that HERV expression delineates AML subtypes with different prognoses. We finally propose a method to select and prioritize CD8

Indexed as

Endogenous RetrovirusesLeukemia, Myeloid, AcuteCD8-Positive T-LymphocytesEpitopes, T-LymphocyteHumansImmunotherapyStem CellsEpitopes, T-Lymphocyte

Identifiers

PMID35759575
PMCPMC9540360
OpenAlexW4283657235

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.