Evidence map›Paper›PMID 35755662›Full record

ArticleFrontiers in plant science2022

Dynamic Transcriptome-Based Weighted Gene Co-expression Network Analysis Reveals Key Modules and Hub Genes Associated With the Structure and Nutrient Formation of Endosperm for Wax Corn.

Tingchun Li, Fanna Kong, Qing Dong, Dafeng Xu, Guihu Liu, Yanli Lei, Huaying Yang, Yingbing Zhou, Cheng Li

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Tingchun LiTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Fanna KongTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Qing DongTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Dafeng XuTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Guihu LiuTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Yanli LeiTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Huaying YangTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Yingbing ZhouTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Cheng LiTobacco Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China.
Tobacco Research Institute · CNAnhui Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The endosperm of corn kernel consists of two components, a horny endosperm, and a floury endosperm. In the experiment, a kind of floury endosperm corn was identified. The result of phenotypic trait analysis and determination of amino acid content showed that the floury endosperm filled with the small, loose, and scattered irregular spherical shape starch granules and contained higher content of amino acid. The starch biochemical properties are similar between floury corns and regular flint corn. By using dynamically comparative transcriptome analysis of endosperm at 20, 25, and 30 DAP, a total of 113.42 million raw reads and 50.508 thousand genes were obtained. By using the weighted gene co-expression network analysis, 806 genes and six modules were identified. And the turquoise module with 459 genes was proved to be the key module closely related to the floury endosperm formation. Nine zein genes in turquoise module, including two

Indexed as

dynamic comparative transcriptome analysisfloury endospermmodules and hub geneswaxy cornweighted gene co-expression network analysis

Identifiers

PMID35755662
PMCPMC9218491
OpenAlexW4285741083

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.