Evidence map›Paper›PMID 35752927›Full record

ArticleAndrology2022

Common genetic variation in KATNAL1 non-coding regions is involved in the susceptibility to severe phenotypes of male infertility.

Miriam Cerván-Martín, Lara Bossini-Castillo, Andrea Guzmán-Jiménez, Rocío Rivera-Egea, Nicolás Garrido, Saturnino Lujan, Gema Romeu, Samuel Santos-Ribeiro, IVIRMA Group, Lisbon Clinical Group and 21 more

Open access · greenAbstract read
In one paragraph

Article in Andrology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 9 institutions in 2 countries.

Miriam Cerván-MartínDepartamento de Genética e Instituto de Biotecnología, Centro de Investigación Biomédica, Universidad de Granada, Granada, Spain.
Lara Bossini-CastilloDepartamento de Genética e Instituto de Biotecnología, Centro de Investigación Biomédica, Universidad de Granada, Granada, Spain.
Andrea Guzmán-JiménezDepartamento de Genética e Instituto de Biotecnología, Centro de Investigación Biomédica, Universidad de Granada, Granada, Spain.
Rocío Rivera-EgeaAndrology Laboratory and Sperm Bank, IVIRMA Valencia, Valencia, Spain.
Nicolás GarridoIVI Foundation, Instituto de Investigación Sanitaria La Fe (IIS La Fe), Valencia, Spain.
Saturnino LujanServicio de Urología, Hospital Universitari i Politecnic La Fe e Instituto de Investigación Sanitaria La Fe (IIS La Fe), Valencia, Spain.
Gema RomeuServicio de Urología, Hospital Universitari i Politecnic La Fe e Instituto de Investigación Sanitaria La Fe (IIS La Fe), Valencia, Spain.
Samuel Santos-RibeiroIVI-RMA Lisbon, Lisbon, Portugal.
IVIRMA Group
Lisbon Clinical Group
José Antonio CastillaInstituto de Investigación Biosanitaria ibs. GRANADA, Granada, Spain.
María Del Carmen GonzalvoInstituto de Investigación Biosanitaria ibs. GRANADA, Granada, Spain.
Ana ClaveroInstituto de Investigación Biosanitaria ibs. GRANADA, Granada, Spain.
Vicente MaldonadoUGC de Obstetricia y Ginecología, Complejo Hospitalario de Jaén, Jaén, Spain.
Francisco Javier VicenteInstituto de Investigación Biosanitaria ibs. GRANADA, Granada, Spain.
Miguel BurgosDepartamento de Genética e Instituto de Biotecnología, Centro de Investigación Biomédica, Universidad de Granada, Granada, Spain.
Rafael JiménezDepartamento de Genética e Instituto de Biotecnología, Centro de Investigación Biomédica, Universidad de Granada, Granada, Spain.
Sara González-MuñozDepartamento de Genética e Instituto de Biotecnología, Centro de Investigación Biomédica, Universidad de Granada, Granada, Spain.
Josvany Sánchez-CurbeloLaboratory of Seminology and Embryology, Andrology Service-Fundació Puigvert, Barcelona, Spain.
Olga López-RodrigoLaboratory of Seminology and Embryology, Andrology Service-Fundació Puigvert, Barcelona, Spain.
Iris Pereira-CaetanoDepartamento de Genética Humana, Instituto Nacional de Saúde Dr. Ricardo Jorge, Lisbon, Portugal.
Patricia Isabel MarquesInstituto de Investigação e Inovação em Saúde, Universidade do Porto (I3S), Porto, Portugal.ORCID 0000-0001-6050-628X
Filipa CarvalhoInstituto de Investigação e Inovação em Saúde, Universidade do Porto (I3S), Porto, Portugal.
Alberto BarrosInstituto de Investigação e Inovação em Saúde, Universidade do Porto (I3S), Porto, Portugal.
Lluís BassasLaboratory of Seminology and Embryology, Andrology Service-Fundació Puigvert, Barcelona, Spain.
Susana SeixasInstituto de Investigação e Inovação em Saúde, Universidade do Porto (I3S), Porto, Portugal.
João GonçalvesDepartamento de Genética Humana, Instituto Nacional de Saúde Dr. Ricardo Jorge, Lisbon, Portugal.
Sara LarribaHuman Molecular Genetics Group, Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.ORCID 0000-0003-4579-5452
Alexandra Manuel LopesInstituto de Investigação e Inovação em Saúde, Universidade do Porto (I3S), Porto, Portugal.
Rogelio Jesús Palomino-MoralesInstituto de Investigación Biosanitaria ibs. GRANADA, Granada, Spain.
Francisco David CarmonaDepartamento de Genética e Instituto de Biotecnología, Centro de Investigación Biomédica, Universidad de Granada, Granada, Spain.ORCID 0000-0002-1427-7639
Universidad de Granada · ESUniversidade do Porto · PTInstituto de Investigación Biosanitaria de Granada · ESHospital Universitari i Politècnic La Fe · ESInstitut d'Investigació Biomédica de Bellvitge · ESNational Institute of Health Dr. Ricardo Jorge · PTPuigvert Foundation · ESUniversity of Lisbon · PTValencian Infertility Institute · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrevious studies in animal models evidenced that genetic mutations of KATNAL1, resulting in dysfunction of its encoded protein, lead to male infertility through disruption of microtubule remodelling and premature germ cell exfoliation. Subsequent studies in humans also suggested a possible role of KATNAL1 single-nucleotide polymorphisms in the development of male infertility as a consequence of severe spermatogenic failure.

objectivesThe main objective of the present study is to evaluate the effect of the common genetic variation of KATNAL1 in a large and phenotypically well-characterised cohort of infertile men because of severe spermatogenic failure. MATERIALS AND

methodsA total of 715 infertile men because of severe spermatogenic failure, including 210 severe oligospermia and 505 non-obstructive azoospermia patients, as well as 1058 unaffected controls were genotyped for three KATNAL1 single-nucleotide polymorphism taggers (rs2077011, rs7338931 and rs2149971). Case-control association analyses by logistic regression assuming different models and in silico functional characterisation of risk variants were conducted.

resultsGenetic associations were observed between the three analysed taggers and different severe spermatogenic failure groups. However, in all cases, the haplotype model (rs2077011*C | rs7338931*T | rs2149971*A) better explained the observed associations than the three risk alleles independently. This haplotype was associated with non-obstructive azoospermia (adjusted p = 4.96E-02, odds ratio = 2.97), Sertoli-cell only syndrome (adjusted p = 2.83E-02, odds ratio = 5.16) and testicular sperm extraction unsuccessful outcomes (adjusted p = 8.99E-04, odds ratio = 6.13). The in silico analyses indicated that the effect on severe spermatogenic failure predisposition could be because of an alteration of the KATNAL1 splicing pattern.

conclusionsSpecific allelic combinations of KATNAL1 genetic polymorphisms may confer a risk of developing severe male infertility phenotypes by favouring the overrepresentation of a short non-functional transcript isoform in the testis.

Indexed as

AzoospermiaInfertility, MaleKataninOligospermiaAnimalsHumansMalePhenotypePolymorphism, Single NucleotideProtein IsoformsSemenSpermatogenesisKataninKATNAL1 protein, humanProtein IsoformsKATNAL1male infertilitySNPspermatogenesissplicing

Identifiers

PMID35752927
PMCPMC9546047
OpenAlexW4283525324

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.