Evidence map›Paper›PMID 35748117›Full record

ArticleMolecular genetics & genomic medicine2022

The first glycine-to-tryptophan substitution in the COL1A1 gene identified in a patient with progressively-deforming Osteogenesis imperfecta.

Kinga Sałacińska, Izabela Michałus, Iwona Pinkier, Lena Rutkowska, Danuta Chlebna-Sokół, Elżbieta Jakubowska-Pietkiewicz, Łukasz Kępczyński, Dominik Salachna, Agnieszka Gach

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In one paragraph

Article in Molecular genetics & genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Kinga SałacińskaDepartment of Genetics, Polish Mother's Memorial Hospital Research Institute, Lodz, Poland.ORCID 0000-0002-1802-8795
Izabela MichałusDepartment of Endocrinology and Metabolic Diseases, Polish Mother's Memorial Hospital Research Institute, Lodz, Poland.
Iwona PinkierDepartment of Genetics, Polish Mother's Memorial Hospital Research Institute, Lodz, Poland.
Lena RutkowskaDepartment of Genetics, Polish Mother's Memorial Hospital Research Institute, Lodz, Poland.
Danuta Chlebna-SokółDepartment of Bone Metabolic Diseases, University Centre of Paediatric, Medical University of Lodz, Lodz, Poland.
Elżbieta Jakubowska-PietkiewiczDepartment of Paediatric Propedeutics and Bone Metabolic Diseases, Medical University of Lodz, Lodz, Poland.
Łukasz KępczyńskiDepartment of Genetics, Polish Mother's Memorial Hospital Research Institute, Lodz, Poland.
Dominik SalachnaDepartment of Genetics, Polish Mother's Memorial Hospital Research Institute, Lodz, Poland.
Agnieszka GachDepartment of Genetics, Polish Mother's Memorial Hospital Research Institute, Lodz, Poland.
Polish Mother’s Memorial Hospital Research Institute · PLMedical University of Lodz · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOsteogenesis imperfecta (OI) is a genetic disorder of connective tissue with variable phenotype and heterogeneous genetic background. Majority of reported mutations are glycine substitutions, whose clinical outcome ranges from mild to perinatal lethal. The phenotype appears to be influenced by the properties of amino acid side chain and the degree of structural aberration of collagen molecules. Since the genotype-phenotype correlation remains unclear, the severity of mutation is mostly predicted according to previously-reported cases. Although the number of OI variants is constantly expanding, no glycine-to-tryptophan substitutions have been reported in COL1A1 gene.

methodsA sample from a 15-year-old girl presenting with progressively-deforming OI type III was tested using an NGS custom gene panel. Multiple bioinformatic and interpretation tools, including mutation databases and conservation analysis, were used for variant classification. The presence of the mutation was verified by Sanger sequencing.

resultsA novel heterozygous mutation c.733G>T was identified in the COL1A1 gene (p.Gly245Trp).

conclusionsThe discovery of this novel glycine-to-tryptophan substitution located in the COL1A1 gene broadens the spectrum of mutations underlying this rare disease and provides useful information on the clinical outcome of such substitutions.

Indexed as

Osteogenesis ImperfectaCollagen Type ICollagen Type I, alpha 1 ChainGlycineHumansTryptophanCollagen Type ICollagen Type I, alpha 1 ChainGlycineTryptophancollagen type Igenotype-phenotype correlationNext Generation Sequencingosteogenesis imperfecta

Identifiers

PMID35748117
PMCPMC9356551
OpenAlexW4283364022

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.