Evidence map›Paper›PMID 35743641›Full record

ArticleJournal of personalized medicine2022

Identification of Genomic Variants Associated with the Risk of Acute Lymphoblastic Leukemia in Native Americans from Brazilian Amazonia.

Luciana P C Leitão, Darlen C de Carvalho, Juliana C G Rodrigues, Marianne R Fernandes, Alayde V Wanderley, Lui W M S Vinagre, Natasha M da Silva, Lucas F Pastana, Laura P A Gellen, Matheus C E Assunção and 8 more

Open access · goldAbstract read
In one paragraph

Article in Journal of personalized medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 1 country.

Luciana P C LeitãoOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.
Darlen C de CarvalhoOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.ORCID 0000-0002-2716-860X
Juliana C G RodriguesOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.ORCID 0000-0003-1665-3535
Marianne R FernandesOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.ORCID 0000-0002-1396-3442
Alayde V WanderleyPediatrics Department, Ophir Loyola Hospital, Belém 66063-240, PA, Brazil.
Lui W M S VinagreOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.ORCID 0000-0002-7063-6149
Natasha M da SilvaOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.
Lucas F PastanaOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.
Laura P A GellenOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.ORCID 0000-0001-8620-5987
Matheus C E AssunçãoOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.ORCID 0000-0002-1421-5729
Sweny S M FernandesPediatrics Department, Ophir Loyola Hospital, Belém 66063-240, PA, Brazil.
Esdras E B PereiraHuman and Medical Genetics Laboratory, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil.ORCID 0000-0003-4830-4233
André M Ribeiro-Dos-SantosHuman and Medical Genetics Laboratory, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil.
João F GuerreiroHuman and Medical Genetics Laboratory, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil.ORCID 0000-0003-1979-3656
Ândrea Ribeiro-Dos-SantosHuman and Medical Genetics Laboratory, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil.ORCID 0000-0001-7001-1483
Paulo P de AssumpçãoOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.
Sidney E B Dos SantosHuman and Medical Genetics Laboratory, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil.
Ney P C Dos SantosOncology Research Nucleus, Universidade Federal do Pará, Belém 66073-005, PA, Brazil.
Universidade Federal do Pará · BRFaculdade de Ciências Médicas de Minas Gerais · BRUniversidade Presidente Antônio Carlos · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A number of genomic variants related to native American ancestry may be associated with an increased risk of developing Acute Lymphoblastic Leukemia (ALL), which means that Latin American and hispanic populations from the New World may be relatively susceptible to this disease. However, there has not yet been any comprehensive investigation of the variants associated with susceptibility to ALL in traditional Amerindian populations from Brazilian Amazonia. We investigated the exomes of the 18 principal genes associated with susceptibility to ALL in samples of 64 Amerindians from this region, including cancer-free individuals and patients with ALL. We compared the findings with the data on populations representing five continents available in the 1000 Genomes database. The variation in the allele frequencies found between the different groups was evaluated using Fisher's exact test. The analyses of the exomes of the Brazilian Amerindians identified 125 variants, seven of which were new. The comparison of the allele frequencies between the two Amerindian groups analyzed in the present study (ALL patients vs. cancer-free individuals) identified six variants (rs11515, rs2765997, rs1053454, rs8068981, rs3764342, and rs2304465) that may be associated with susceptibility to ALL. These findings contribute to the identification of genetic variants that represent a potential risk for ALL in Amazonian Amerindian populations and might favor precision oncology measures.

Indexed as

Acute Lymphoblastic LeukemiaAmerindian populationsgenetic susceptibility

Identifiers

PMID35743641
PMCPMC9224820
OpenAlexW4281481357

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.