Evidence map›Paper›PMID 35743007›Full record

ReviewInternational journal of molecular sciences2022

Functional Allele Validation by Gene Editing to Leverage the Wealth of Genetic Resources for Crop Improvement.

Michael J Thomson, Sudip Biswas, Nikolaos Tsakirpaloglou, Endang M Septiningsih

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Michael J ThomsonDepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA.ORCID 0000-0003-1868-6867
Sudip BiswasDepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA.ORCID 0000-0001-8062-2149
Nikolaos TsakirpaloglouDepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA.ORCID 0000-0001-6710-0709
Endang M SeptiningsihDepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA.ORCID 0000-0002-9481-304X
Texas A&M University · US

Funding

Texas A&M AgriLife Research NATexas A&M University X-Grant NAUnited States Department of Agriculture 2017-67013-26194; 2022-67013-36210; 2020-67013-31811
6 · The paper itself

Abstract

Advances in molecular technologies over the past few decades, such as high-throughput DNA marker genotyping, have provided more powerful plant breeding approaches, including marker-assisted selection and genomic selection. At the same time, massive investments in plant genetics and genomics, led by whole genome sequencing, have led to greater knowledge of genes and genetic pathways across plant genomes. However, there remains a gap between approaches focused on forward genetics, which start with a phenotype to map a mutant locus or QTL with the goal of cloning the causal gene, and approaches using reverse genetics, which start with large-scale sequence data and work back to the gene function. The recent establishment of efficient CRISPR-Cas-based gene editing promises to bridge this gap and provide a rapid method to functionally validate genes and alleles identified through studies of natural variation. CRISPR-Cas techniques can be used to knock out single or multiple genes, precisely modify genes through base and prime editing, and replace alleles. Moreover, technologies such as protoplast isolation, in planta transformation, and the use of developmental regulatory genes promise to enable high-throughput gene editing to accelerate crop improvement.

Indexed as

CRISPR-Cas SystemsGene EditingAllelesGenome, PlantPlant Breedingallele miningcandidate genescausal variantsCRISPR-Cas9crop biotechnologygenome editinggenomics

Identifiers

PMID35743007
PMCPMC9223900
OpenAlexW4282549768

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.