Evidence map›Paper›PMID 35741788›Full record

ArticleGenes2022

Nuclear and Mitochondrial Phylogenomics of the Sifakas Reveal Cryptic Variation in the Diademed Sifaka.

Melissa T R Hawkins, Carolyn A Bailey, Allyshia M Brown, Jen Tinsman, Ryan A Hagenson, Ryan R Culligan, Adena G Barela, Jean C Randriamanana, Jean F Ranaivoarisoa, John R Zaonarivelo and 1 more

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Melissa T R HawkinsDepartment of Vertebrate Zoology, Division of Mammals, National Museum of Natural History, 10th and Constitution Ave, NW, Washington, DC 20560, USA.ORCID 0000-0001-8929-1593
Carolyn A BaileyDepartment of Conservation Genetics, Omaha's Henry Doorly Zoo & Aquarium, 3701 S 10th St, Omaha, NE 68107, USA.
Allyshia M BrownDepartment of Conservation Genetics, Omaha's Henry Doorly Zoo & Aquarium, 3701 S 10th St, Omaha, NE 68107, USA.ORCID 0000-0002-4915-1083
Jen TinsmanDepartment of Conservation Genetics, Omaha's Henry Doorly Zoo & Aquarium, 3701 S 10th St, Omaha, NE 68107, USA.ORCID 0000-0003-2452-4573
Ryan A HagensonDepartment of Conservation Genetics, Omaha's Henry Doorly Zoo & Aquarium, 3701 S 10th St, Omaha, NE 68107, USA.ORCID 0000-0001-9750-1925
Ryan R CulliganDepartment of Conservation Genetics, Omaha's Henry Doorly Zoo & Aquarium, 3701 S 10th St, Omaha, NE 68107, USA.ORCID 0000-0003-0641-9008
Adena G BarelaDepartment of Conservation Genetics, Omaha's Henry Doorly Zoo & Aquarium, 3701 S 10th St, Omaha, NE 68107, USA.
Jean C RandriamananaMadagascar Biodiversity Partnership, VO12 Bis a Manakambahiny, Antananarivo 101, Madagascar.
Jean F RanaivoarisoaAnthropobiologie et Développement Durable, Faculty of Sciences, University of Antananarivo, Antananarivo 101, Madagascar.ORCID 0000-0003-2197-6099
John R ZaonariveloFaculty of Sciences, Président du Collège des Enseignants, University of Antsiranana, Antsiranana 201, Madagascar.
Edward E LouisDepartment of Conservation Genetics, Omaha's Henry Doorly Zoo & Aquarium, 3701 S 10th St, Omaha, NE 68107, USA.
Madagascar Biodiversity Partnership · MGNational Museum of Natural History · USUniversité d’Antsiranana · MGUniversity of Antananarivo · MG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The most comprehensive phylogenomic reconstruction to date was generated on all nominal taxa within the lemur genus Propithecus. Over 200 wild-caught individuals were included in this study to evaluate the intra and interspecific relationships across this genus. Ultraconserved Elements (UCEs) resulted in well-supported phylogenomic trees. Complete mitochondrial genomes (CMGs) largely agreed with the UCEs, except where a mitochondrial introgression was detected between one clade of the diademed sifaka (Propithecus diadema) and the Milne-Edwards sifaka (P. edwardsi). Additionally, the crowned (P. coronatus) and Von der Decken’s (P. deckeni) sifakas belonged to a single admixed lineage from UCEs. Further sampling across these two species is warranted to determine if our sampling represents a hybrid zone. P. diadema recovered two well-supported clades, which were dated and estimated as being ancient as the split between the Perrier’s (P. perrierii) and silky (P. candidus) sifakas. The reconstructed demographic history of the two clades also varied over time. We then modeled the modern ecological niches of the two cryptic P. diadema clades and found that they were significantly diverged (p < 0.01). These ecological differences result in a very limited zone of geographic overlap for the P. diadema clades (<60 km2). Niche models also revealed that the Onive River acts as a potential barrier to dispersal between P. diadema and P. edwardsi. Further taxonomic work is required on P. diadema to determine if its taxonomic status should be revised. This first genomic evaluation of the genus resolved the relationships between the taxa and the recovered cryptic diversity within one species.

Indexed as

IndriidaeAnimalsEcosystemHumansMitochondriaPhylogenySea Urchinsecological niche modelinggenomicsIndriidaeMadagascarPropithecusUltraconserved Elements

Identifiers

PMID35741788
PMCPMC9223071
OpenAlexW4281631472

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.