Evidence map›Paper›PMID 35741779›Full record

ArticleGenes2022

Profiling the Tumor-Infiltrating Lymphocytes in Gastric Cancer Reveals Its Implication in the Prognosis.

Weiqiang Yu, Shuaili Wang, Qiqi Rong, Olugbenga Emmanuel Ajayi, Kongwang Hu, Qingfa Wu

Abstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. First-Line Nivolumab and Relatlimab Plus Chemotherapy for Gastric or Gastroesophageal Junction Adenocarcinoma: The Phase II RELATIVITY-060 Study.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Weiqiang YuDivision of Molecular Medicine, CAS Key Laboratory of Innate Immunity and Chronic Disease, Department of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230026, China.
Shuaili WangDivision of Molecular Medicine, CAS Key Laboratory of Innate Immunity and Chronic Disease, Department of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230026, China.
Qiqi RongDivision of Molecular Medicine, CAS Key Laboratory of Innate Immunity and Chronic Disease, Department of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230026, China.
Olugbenga Emmanuel AjayiDivision of Molecular Medicine, CAS Key Laboratory of Innate Immunity and Chronic Disease, Department of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230026, China.
Kongwang HuDepartment of General Surgery, Fuyang Hospital Affiliated to Anhui Medical University, Fuyang 236000, China.
Qingfa WuDivision of Molecular Medicine, CAS Key Laboratory of Innate Immunity and Chronic Disease, Department of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230026, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gastric cancer is the fifth most common malignancy and the third leading cause of cancer-related mortality worldwide. Immunotherapy offers promising new treatment options for gastric cancer patients; however, it is only effective in a limited fraction of patients. In this study, we evaluated the composition of 22 tumor-infiltrating lymphocytes (TILs) in TCGA Stomach Adenocarcinoma (STAD) using deconvolution-based method by analyzing the publicly available bulk tumor RNA-seq data. The patients were classified into high-TIL and low-TIL subtypes based on their immune cell profiles and prognosis outputs. The differentially expressed genes (DEGs) between the two subtypes were identified, and GO/KEGG analysis showed that broad immune genes, such as PD-L1 and PD-1, were highly expressed in the high-TIL subtype. A comprehensive protein-protein interaction (PPI) network centered on DEGs was built, and 16 hub genes of the network were further identified. Based on the hub genes, an elastic model with 11 gene signatures (

Indexed as

AdenocarcinomaStomach NeoplasmsHumansLymphocytes, Tumor-InfiltratingPrognosisTumor Microenvironmentgastric cancerhub-genesimmunotherapyprognosistumor-infiltrating lymphocytes

Identifiers

PMID35741779
PMCPMC9222794

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.