Evidence map›Paper›PMID 35741289›Full record

ArticleDiagnostics (Basel, Switzerland)2022

Unsupervised Learning Based on Multiple Descriptors for WSIs Diagnosis.

Taimoor Shakeel Sheikh, Jee-Yeon Kim, Jaesool Shim, Migyung Cho

Abstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Taimoor Shakeel SheikhDepartment of Computer & Media Engineering, Tongmyong University, Busan 48520, Korea.ORCID 0000-0002-8020-5203
Jee-Yeon KimDepartment of Pathology, Pusan National University Yangsan Hospital, School of Medicine, Pusan National University, Yangsan-si 50612, Korea.ORCID 0000-0002-0503-984X
Jaesool ShimSchool of Mechanical Engineering, Yeungnam University, Gyeongsan 38541, Korea.ORCID 0000-0001-6275-1879
Migyung ChoDepartment of Computer & Media Engineering, Tongmyong University, Busan 48520, Korea.ORCID 0000-0002-0128-6181

Funding

National Research Foundation of Korea MSIT No. 2021R1A2B5B01001789
6 · The paper itself

Abstract

An automatic pathological diagnosis is a challenging task because histopathological images with different cellular heterogeneity representations are sometimes limited. To overcome this, we investigated how the holistic and local appearance features with limited information can be fused to enhance the analysis performance. We propose an unsupervised deep learning model for whole-slide image diagnosis, which uses stacked autoencoders simultaneously feeding multiple-image descriptors such as the histogram of oriented gradients and local binary patterns along with the original image to fuse the heterogeneous features. The pre-trained latent vectors are extracted from each autoencoder, and these fused feature representations are utilized for classification. We observed that training with additional descriptors helps the model to overcome the limitations of multiple variants and the intricate cellular structure of histopathology data by various experiments. Our model outperforms existing state-of-the-art approaches by achieving the highest accuracies of 87.2 for ICIAR2018, 94.6 for Dartmouth, and other significant metrics for public benchmark datasets. Our model does not rely on a specific set of pre-trained features based on classifiers to achieve high performance. Unsupervised spaces are learned from the number of independent multiple descriptors and can be used with different variants of classifiers to classify cancer diseases from whole-slide images. Furthermore, we found that the proposed model classifies the types of breast and lung cancer similar to the viewpoint of pathologists by visualization. We also designed our whole-slide image processing toolbox to extract and process the patches from whole-slide images.

Indexed as

autoencodersclassificationcomputer assisted diagnosissupervised learningunsupervised learningwhole-slide imaging

Identifiers

PMID35741289
PMCPMC9222016

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.