Evidence map›Paper›PMID 35740993›Full record

ArticleCells2022

Lung Spatial Profiling Reveals a T Cell Signature in COPD Patients with Fatal SARS-CoV-2 Infection.

Chen Xi Yang, Michael Tomchaney, Manuel F Landecho, Borja R Zamacona, Marta Marin Oto, Javier Zulueta, Joshua Malo, Steve Knoper, Marco Contoli, Alberto Papi and 10 more

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 4 countries.

Chen Xi YangCentre for Heart and Lung Innovation, St. Paul's Hospital, Vancouver, BC V6T 1Z4, Canada.
Michael TomchaneyAsthma and Airway Disease Research Center, College of Medicine, University of Arizona College of Medicine, Tucson, AZ 85719, USA.ORCID 0000-0001-8521-0901
Manuel F LandechoDepartment of Internal Medicine, Clinica Universidad de Navarra, 31008 Pamplona, Spain.ORCID 0000-0003-3234-8805
Borja R ZamaconaDepartment of Internal Medicine, Clinica Universidad de Navarra, 31008 Pamplona, Spain.
Marta Marin OtoDepartment of Internal Medicine, Clinica Universidad de Navarra, 31008 Pamplona, Spain.ORCID 0000-0003-0777-3850
Javier ZuluetaMount-Sinai Hospital, New York, NY 10029, USA.
Joshua MaloDepartment of Surgery, University of Arizona, Tucson, AZ 85719, USA.
Steve KnoperDepartment of Surgery, University of Arizona, Tucson, AZ 85719, USA.
Marco ContoliPulmonary Division, University of Ferrara, 44121 Ferrara, Italy.ORCID 0000-0002-2731-5809
Alberto PapiPulmonary Division, University of Ferrara, 44121 Ferrara, Italy.ORCID 0000-0002-6924-4500
Dragoş M VasilescuCentre for Heart and Lung Innovation, St. Paul's Hospital, Vancouver, BC V6T 1Z4, Canada.ORCID 0000-0003-3936-4365
Maor SaulerDepartment of Medicine, Yale University, New Haven, CT 06520, USA.
Christof StraubNanostring Technologies, Seattle, WA 98109, USA.
Cheryl TanNanostring Technologies, Seattle, WA 98109, USA.
Fernando D MartinezAsthma and Airway Disease Research Center, College of Medicine, University of Arizona College of Medicine, Tucson, AZ 85719, USA.
Deepta BhattacharyaDepartment of Immunobiology, University of Arizona, Tucson, AZ 85719, USA.
Ivan O RosasDepartment of Medicine and Center for Translational Research, Baylor College of Medicine, Houston, TX 77030, USA.
Farrah KheradmandDepartment of Medicine and Center for Translational Research, Baylor College of Medicine, Houston, TX 77030, USA.
Tillie-Louise HackettCentre for Heart and Lung Innovation, St. Paul's Hospital, Vancouver, BC V6T 1Z4, Canada.ORCID 0000-0001-7134-3287
Francesca PolverinoDepartment of Medicine and Center for Translational Research, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0001-9686-5698
University of Arizona · USBaylor College of Medicine · USClinica Universidad de Navarra · ESUniversity of British Columbia · CANanostring Technologies (United States) · USUniversity of Ferrara · ITMount Sinai Hospital · USYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
B cell-adaptive Immune Profile in Emphysema-predominant COPDR01HL149744 · NHLBI · UNIVERSITY OF ARIZONA · PI POLVERINO, FRANCESCA · 2020 to 2024
$3.4M
NCATS NIH HHS UL1 TR001863NHLBI NIH HHS R01 HL149744
6 · The paper itself

Abstract

People with pre-existing lung diseases such as chronic obstructive pulmonary disease (COPD) are more likely to get very sick from SARS-CoV-2 disease 2019 (COVID-19). Still, an interrogation of the immune response to COVID-19 infection, spatially throughout the lung structure, is lacking in patients with COPD. For this study, we characterized the immune microenvironment of the lung parenchyma, airways, and vessels of never- and ever-smokers with or without COPD, all of whom died of COVID-19, using spatial transcriptomic and proteomic profiling. The parenchyma, airways, and vessels of COPD patients, compared to control lungs had (1) significant enrichment for lung-resident CD45RO

Indexed as

COVID-19Pulmonary Disease, Chronic ObstructiveHumansLungProteomicsSARS-CoV-2chronic obstructive pulmonary disease (COPD)COVID-19T cells

Identifiers

PMID35740993
PMCPMC9220844
OpenAlexW4283463319

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.