Evidence map›Paper›PMID 35740291›Full record

ArticleBiomedicines2022

Automatic Segmentation of Retinal Fluid and Photoreceptor Layer from Optical Coherence Tomography Images of Diabetic Macular Edema Patients Using Deep Learning and Associations with Visual Acuity.

Huan-Yu Hsu, Yu-Bai Chou, Ying-Chun Jheng, Zih-Kai Kao, Hsin-Yi Huang, Hung-Ruei Chen, De-Kuang Hwang, Shih-Jen Chen, Shih-Hwa Chiou, Yu-Te Wu

Open access · goldAbstract read
In one paragraph

Article in Biomedicines, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Diabetic retinopathy: Looking forward to 2030.Frontiers in endocrinology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Huan-Yu HsuInstitute of Biophotonics, National Yang Ming Chiao Tung University, 155, Sec-2, Li Nong Street, Taipei 112304, Taiwan.
Yu-Bai ChouSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.
Ying-Chun JhengDepartment of Medical Research, Taipei Veterans General Hospital, Taipei 112201, Taiwan.ORCID 0000-0002-2883-4432
Zih-Kai KaoInstitute of Biophotonics, National Yang Ming Chiao Tung University, 155, Sec-2, Li Nong Street, Taipei 112304, Taiwan.ORCID 0000-0002-1662-3873
Hsin-Yi HuangDepartment of Medical Research, Taipei Veterans General Hospital, Taipei 112201, Taiwan.
Hung-Ruei ChenSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.ORCID 0000-0001-7292-397X
De-Kuang HwangSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.ORCID 0000-0001-6346-8485
Shih-Jen ChenSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.
Shih-Hwa ChiouSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.
Yu-Te WuInstitute of Biophotonics, National Yang Ming Chiao Tung University, 155, Sec-2, Li Nong Street, Taipei 112304, Taiwan.
National Yang Ming Chiao Tung University · TWTaipei Veterans General Hospital · TW

Funding

Brain Research Center of National Yang-Ming University 109BRC-B701Ministry of Science and Technology, Taiwan 108-2813-C-075-001-BMinistry of Science and Technology, Taiwan MOST110-2221-E-A49A-504-MY3National Health Research Institutes NHRI-EX111-11021EINational Yang Ming Chiao Tung University Brain Research Center 111W32701National Yang Ming Chiao Tung University from the Featured Areas Research Center Program within the framework of the Higher Education Sprout Project by the Ministry of Education (MOE) in Taiwan MOST111-2823-8-A49-001
6 · The paper itself

Abstract

Diabetic macular edema (DME) is a highly common cause of vision loss in patients with diabetes. Optical coherence tomography (OCT) is crucial in classifying DME and tracking the results of DME treatment. The presence of intraretinal cystoid fluid (IRC) and subretinal fluid (SRF) and the disruption of the ellipsoid zone (EZ), which is part of the photoreceptor layer, are three crucial factors affecting the best corrected visual acuity (BCVA). However, the manual segmentation of retinal fluid and the EZ from retinal OCT images is laborious and time-consuming. Current methods focus only on the segmentation of retinal features, lacking a correlation with visual acuity. Therefore, we proposed a modified U-net, a deep learning algorithm, to segment these features from OCT images of patients with DME. We also correlated these features with visual acuity. The IRC, SRF, and EZ of the OCT retinal images were manually labeled and checked by doctors. We trained the modified U-net model on these labeled images. Our model achieved Sørensen-Dice coefficients of 0.80 and 0.89 for IRC and SRF, respectively. The area under the receiver operating characteristic curve (ROC) for EZ disruption was 0.88. Linear regression indicated that EZ disruption was the factor most strongly correlated with BCVA. This finding agrees with that of previous studies on OCT images. Thus, we demonstrate that our segmentation network can be feasibly applied to OCT image segmentation and assist physicians in assessing the severity of the disease.

Indexed as

deep learningdiabetic macular edemaoptical coherence tomography segmentationvisual acuity

Identifiers

PMID35740291
PMCPMC9220118
OpenAlexW4281763345

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.