Evidence map›Paper›PMID 35739269›Full record

Observational studyNature medicine2022

Molecular profiling identifies targeted therapy opportunities in pediatric solid cancer.

Alanna J Church, Laura B Corson, Pei-Chi Kao, Alma Imamovic-Tuco, Deirdre Reidy, Duong Doan, Wenjun Kang, Navin Pinto, Luke Maese, Theodore W Laetsch and 37 more

Open access · greenAbstract readObservational Study
In one paragraph

Observational study in Nature medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 60 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Observational
  5. Article
  6. Review
  7. Observational
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  14. Improving Global Access to Genomic Profiling in Rare Pediatric Cancers.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
  15. Article
  16. Article
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  18. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

47 authors at 20 institutions in 1 country.

Alanna J Church *Boston Children's Hospital, Boston, MA, USA. Alanna.Church@childrens.harvard.edu.ORCID http://orcid.org/0000-0002-4835-5770
Laura B Corson *Dana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA, USA.
Pei-Chi KaoBoston Children's Hospital, Boston, MA, USA.
Alma Imamovic-TucoDana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA, USA.
Deirdre ReidyDana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA, USA.
Duong DoanDana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA, USA.
Wenjun KangUniversity of Chicago, Chicago, IL, USA.
Navin PintoSeattle Children's Hospital, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-8775-6710
Luke MaesePrimary Children's Hospital, Salt Lake City, UT, USA.ORCID http://orcid.org/0000-0002-8739-9100
Theodore W LaetschUniversity of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-8497-3138
AeRang KimChildren's National Hospital, Washington, DC, USA.
Susan I ColaceNationwide Children's Hospital, Columbus, OH, USA.
Margaret E MacyChildren's Hospital of Colorado, Aurora, CO, USA.ORCID http://orcid.org/0000-0001-6446-9180
Mark A ApplebaumUniversity of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-9766-8477
Rochelle BagatellChildren's Hospital of Philadelphia, Philadelphia, PA, USA.
Amit J SabnisUniversity of California San Francisco Benioff Children's Hospital, San Francisco, CA, USA.
Daniel A WeiserChildren's Hospital at Montefiore, New York, NY, USA.ORCID http://orcid.org/0000-0001-6673-5323
Julia L Glade-BenderColumbia University Irving Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0001-5316-6440
Alan C HomansUniversity of Vermont Medical Center, Burlington, VT, USA.
John HippsUniversity of North Carolina Medical Center, Chapel Hill, NC, USA.ORCID http://orcid.org/0000-0003-2969-5101
Haley HarrisBoston Children's Hospital, Boston, MA, USA.
Danielle ManningBrigham and Women's Hospital, Boston, MA, USA.
Alyaa Al-IbraheemiBoston Children's Hospital, Boston, MA, USA.
Yvonne LiHarvard Medical School, Boston, MA, USA.
Hersh GuptaHarvard Medical School, Boston, MA, USA.
Andrew D CherniackHarvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0470-0111
Ying-Chun LoBoston Children's Hospital, Boston, MA, USA.
Gianna R StrandDana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA, USA.
Lobin A LeeDana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA, USA.
R Seth PinchesBoston Children's Hospital, Boston, MA, USA.
Lorena Lazo De La VegaDana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA, USA.ORCID http://orcid.org/0000-0003-3609-0098
Maegan V HardenBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-3607-6416
Niall J LennonBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Seong ChoiUniversity of Chicago, Chicago, IL, USA.
Hannah ComeauDana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA, USA.
Marian H HarrisBoston Children's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9956-664X
Suzanne J ForrestHarvard Medical School, Boston, MA, USA.
Catherine M ClintonBoston Children's Hospital, Boston, MA, USA.
Brian D CromptonHarvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-9404-6621
Junne KamiharaHarvard Medical School, Boston, MA, USA.
Laura E MacConaillHarvard Medical School, Boston, MA, USA.
Samuel L VolchenboumUniversity of Chicago, Chicago, IL, USA.
Neal I LindemanHarvard Medical School, Boston, MA, USA.
Eliezer Van AllenHarvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-0201-4444
Steven G DuBoisHarvard Medical School, Boston, MA, USA.
Wendy B LondonBoston Children's Hospital, Boston, MA, USA.
Katherine A JanewayHarvard Medical School, Boston, MA, USA.
Boston Children's Hospital · USBroad Institute · USHarvard University · USBrigham and Women's Hospital · USChildren's Hospital of Philadelphia · USUniversity of Illinois Chicago · USDana-Farber/Boston Children's Cancer and Blood Disorders Center · USAlbert Einstein College of Medicine · USChildren's Hospital Colorado · USChildren's National · USLoyola University Chicago · USMemorial Sloan Kettering Cancer Center · USNationwide Children's Hospital · USPhiladelphia College of Osteopathic Medicine · USPrimary Children's Hospital · USSeattle Children's Hospital · USUniversity of California, San Francisco · USUniversity of Connecticut · USUniversity of Massachusetts Chan Medical School · USUniversity of North Carolina at Chapel Hill · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Defining and targeting ER quality control dependence in rhabdomyosarcomaK08CA218691 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SABNIS, AMIT J. · 2018 to 2022
$1.1M
NCI NIH HHS K08 CA218691NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

To evaluate the clinical impact of molecular tumor profiling (MTP) with targeted sequencing panel tests, pediatric patients with extracranial solid tumors were enrolled in a prospective observational cohort study at 12 institutions. In the 345-patient analytical population, median age at diagnosis was 12 years (range 0-27.5); 298 patients (86%) had 1 or more alterations with potential for impact on care. Genomic alterations with diagnostic, prognostic or therapeutic significance were present in 61, 16 and 65% of patients, respectively. After return of the results, impact on care included 17 patients with a clarified diagnostic classification and 240 patients with an MTP result that could be used to select molecularly targeted therapy matched to identified alterations (MTT). Of the 29 patients who received MTT, 24% had an objective response or experienced durable clinical benefit; all but 1 of these patients received targeted therapy matched to a gene fusion. Of the diagnostic variants identified in 209 patients, 77% were gene fusions. MTP with targeted panel tests that includes fusion detection has a substantial clinical impact for young patients with solid tumors.

Indexed as

High-Throughput Nucleotide SequencingNeoplasmsAdolescentAdultBiomarkers, TumorChildChild, PreschoolGenomicsHumansInfantInfant, NewbornMolecular Targeted TherapyProspective StudiesYoung AdultBiomarkers, Tumor

Identifiers

PMID35739269
PMCPMC10953704
OpenAlexW4283332403

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.