Evidence map›Paper›PMID 35737709›Full record

ArticlePLoS neglected tropical diseases2022

Geographical distribution and genetic diversity of Plasmodium vivax reticulocyte binding protein 1a correlates with patient antigenicity.

Ji-Hoon Park, Min-Hee Kim, Edwin Sutanto, Seok-Won Na, Min-Jae Kim, Joon Sup Yeom, Myat Htut Nyunt, Mohammed Mohieldien Abbas Elfaki, Muzamil Mahdi Abdel Hamid, Seok Ho Cha and 17 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 14 institutions in 13 countries.

Ji-Hoon ParkDepartment of Medical Environmental Biology and Tropical Medicine, School of Medicine, Kangwon National University, Chuncheon, Republic of Korea.ORCID 0000-0002-4391-0456
Min-Hee KimDepartment of Medical Environmental Biology and Tropical Medicine, School of Medicine, Kangwon National University, Chuncheon, Republic of Korea.ORCID 0000-0002-4348-5760
Edwin SutantoEijkman Institute for Molecular Biology, Jakarta, Indonesia.ORCID 0000-0002-2997-4648
Seok-Won NaDepartment of Medical Environmental Biology and Tropical Medicine, School of Medicine, Kangwon National University, Chuncheon, Republic of Korea.ORCID 0000-0002-8847-4344
Min-Jae KimDepartment of Infectious Diseases, Asan Medical Center, Seoul, Republic of Korea.
Joon Sup YeomDepartment of Internal Medicine, Yonsei University College of Medicine, Seoul, Republic of Korea.ORCID 0000-0001-8940-7170
Myat Htut NyuntDepartment of Medical Research, Yangon, Myanmar.ORCID 0000-0002-2026-8026
Mohammed Mohieldien Abbas ElfakiDepartment of Parasitology and Medical Entomology, Institute of Endemic Diseases, University of Khartoum, Khartoum, Sudan.ORCID 0000-0001-8231-2902
Muzamil Mahdi Abdel HamidDepartment of Parasitology and Medical Entomology, Institute of Endemic Diseases, University of Khartoum, Khartoum, Sudan.ORCID 0000-0002-6157-4388
Seok Ho ChaDepartment of Parasitology and Tropical Medicine, Inha University School of Medicine, Incheon, Republic of Korea.ORCID 0000-0002-0005-8320
Sisay Getachew AlemuCollege of Natural Sciences, Addis Ababa University, Addis Ababa, Ethiopia.
Kanlaya SriprawatShoklo Malaria Research Unit, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Mae Sot, Tak, Thailand.
Nicholas M AnsteyGlobal and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.
Matthew J GriggGlobal and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.ORCID 0000-0001-9914-8352
Bridget E BarberGlobal and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.
Timothy WilliamInfectious Diseases Society Sabah-Menzies School of Health Research Clinical Research Unit, Sabah, Malaysia.
Qi GaoNational Health Commission Key Laboratory of Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, China.ORCID 0000-0002-8068-7599
Yaobao LiuNational Health Commission Key Laboratory of Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, China.
Richard D PearsonWellcome Sanger Institute, Hinxton, Cambridge, United Kingdom.ORCID 0000-0002-7386-3566
Ric N PriceGlobal and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.ORCID 0000-0003-2000-2874
Francois NostenShoklo Malaria Research Unit, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Mae Sot, Tak, Thailand.
Sung-Il YoonDivision of Biomedical Convergence, College of Biomedical Science, Kangwon National University, Chuncheon, Republic of Korea.
Joo Hwan NoHost-Parasite Research Laboratory, Institut Pasteur Korea, Seongnam, Republic of Korea.
Eun-Taek HanDepartment of Medical Environmental Biology and Tropical Medicine, School of Medicine, Kangwon National University, Chuncheon, Republic of Korea.
Sarah AuburnGlobal and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.ORCID 0000-0002-4638-536X
Bruce RussellDepartment of Microbiology and Immunology, University of Otago, Dunedin, New Zealand.
Jin-Hee HanDepartment of Medical Environmental Biology and Tropical Medicine, School of Medicine, Kangwon National University, Chuncheon, Republic of Korea.ORCID 0000-0003-0836-6675
Kangwon National University · KRMahidol University · THCharles Darwin University · AUJiangsu Institute of Parasitic Diseases · CNUniversity of Khartoum · SDBioReliance (United States) · USEijkman Institute for Molecular Biology · IDInha University · KRInstitut Pasteur Korea · KRMyanmar Oxford Clinical Research Unit · MMQueen Elizabeth Hospital · MYUniversity of Otago · NZWellcome Sanger Institute · GBYonsei University · KR

Funding

Emerging zoonotic malaria in Malaysia: strengthening surveillance and evaluating population genetic structure to improve regional risk prediction toolsR01AI160457 · NIAID · INFECTIOUS DISEASE SOCIETY KOTA KINABALU · PI RAJAHRAM, GIRI · 2021 to 2025
$674k
NIAID NIH HHS R01 AI160457Wellcome Trust 200909Wellcome Trust 200909/Z/16/Z
6 · The paper itself

Abstract

Plasmodium vivax is the most widespread cause of human malaria. Recent reports of drug resistant vivax malaria and the challenge of eradicating the dormant liver forms increase the importance of vaccine development against this relapsing disease. P. vivax reticulocyte binding protein 1a (PvRBP1a) is a potential vaccine candidate, which is involved in red cell tropism, a crucial step in the merozoite invasion of host reticulocytes. As part of the initial evaluation of the PvRBP1a vaccine candidate, we investigated its genetic diversity and antigenicity using geographically diverse clinical isolates. We analysed pvrbp1a genetic polymorphisms using 202 vivax clinical isolates from six countries. Pvrbp1a was separated into six regions based on specific domain features, sequence conserved/polymorphic regions, and the reticulocyte binding like (RBL) domains. In the fragmented gene sequence analysis, PvRBP1a region II (RII) and RIII (head and tail structure homolog, 152-625 aa.) showed extensive polymorphism caused by random point mutations. The haplotype network of these polymorphic regions was classified into three clusters that converged to independent populations. Antigenicity screening was performed using recombinant proteins PvRBP1a-N (157-560 aa.) and PvRBP1a-C (606-962 aa.), which contained head and tail structure region and sequence conserved region, respectively. Sensitivity against PvRBP1a-N (46.7%) was higher than PvRBP1a-C (17.8%). PvRBP1a-N was reported as a reticulocyte binding domain and this study identified a linear epitope with moderate antigenicity, thus an attractive domain for merozoite invasion-blocking vaccine development. However, our study highlights that a global PvRBP1a-based vaccine design needs to overcome several difficulties due to three distinct genotypes and low antigenicity levels.

Indexed as

Malaria, VivaxPlasmodium vivaxAnimalsAntigens, ProtozoanGenetic VariationHumansMerozoitesPolymorphism, GeneticProtozoan ProteinsReticulocytesAntigens, ProtozoanProtozoan Proteins

Identifiers

PMID35737709
PMCPMC9258880
OpenAlexW4283370316

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.