Evidence map›Paper›PMID 35735140›Full record

ArticleThe EMBO journal2022

Nuclear pore complex acetylation regulates mRNA export and cell cycle commitment in budding yeast.

Mercè Gomar-Alba, Vasilisa Pozharskaia, Bogdan Cichocki, Celia Schaal, Arun Kumar, Basile Jacquel, Gilles Charvin, J Carlos Igual, Manuel Mendoza

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Nuclear mRNA export.Acta biochimica et biophysica Sinica · 2024
    Review
  7. Article
  8. Article
  9. A Yeast Mitotic Tale for the Nucleus and the Vacuoles to Embrace.International journal of molecular sciences · 2023
    Review
  10. Article
  11. Review
  12. Cell cycle regulated expression of theCell cycle (Georgetown, Tex.)
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Mercè Gomar-Alba *Institut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.ORCID 0000-0002-7210-0364
Vasilisa Pozharskaia *Institut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.ORCID 0000-0002-6091-9129
Bogdan CichockiInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.
Celia SchaalInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.
Arun KumarDepartment of Cell Biology, Universitat Pompeu Fabra (UPF), Barcelona, Spain.
Basile JacquelInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.
Gilles CharvinInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.ORCID 0000-0002-6852-6952
J Carlos IgualInstitut de Biotecnologia i Biomedicina (BIOTECMED) and Departament de Bioquímica i Biologia Molecular, Universitat de València, Burjassot, Spain.ORCID 0000-0001-6910-5845
Manuel MendozaInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.ORCID 0000-0001-5522-4878
Institut de génétique et de biologie moléculaire et cellulaire · FRCentre National de la Recherche Scientifique · FRUniversitat de València · ESUniversitat Pompeu Fabra · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear pore complexes (NPCs) mediate communication between the nucleus and the cytoplasm, and regulate gene expression by interacting with transcription and mRNA export factors. Lysine acetyltransferases (KATs) promote transcription through acetylation of chromatin-associated proteins. We find that Esa1, the KAT subunit of the yeast NuA4 complex, also acetylates the nuclear pore basket component Nup60 to promote mRNA export. Acetylation of Nup60 recruits the mRNA export factor Sac3, the scaffolding subunit of the Transcription and Export 2 (TREX-2) complex, to the nuclear basket. The Esa1-mediated nuclear export of mRNAs in turn promotes entry into S phase, which is inhibited by the Hos3 deacetylase in G1 daughter cells to restrain their premature commitment to a new cell division cycle. This mechanism is not only limited to G1/S-expressed genes but also inhibits the expression of the nutrient-regulated GAL1 gene specifically in daughter cells. Overall, these results reveal how acetylation can contribute to the functional plasticity of NPCs in mother and daughter yeast cells. In addition, our work demonstrates dual gene expression regulation by the evolutionarily conserved NuA4 complex, at the level of transcription and at the stage of mRNA export by modifying the nucleoplasmic entrance to nuclear pores.

Indexed as

Saccharomyces cerevisiae ProteinsSaccharomycetalesAcetylationActive Transport, Cell NucleusCell CycleHistone AcetyltransferasesHistone DeacetylasesNuclear PoreNuclear Pore Complex ProteinsRNA, MessengerSaccharomyces cerevisiaeHistone AcetyltransferasesHistone DeacetylasesHos3 protein, S cerevisiaeNuA4 protein, S cerevisiaeNuclear Pore Complex ProteinsNup60 protein, S cerevisiaeRNA, MessengerSaccharomyces cerevisiae ProteinsG1-S transitionHos3mRNA exportNuA4nuclear pore complex

Identifiers

PMID35735140
PMCPMC9340480
OpenAlexW4283332783

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.