Evidence map›Paper›PMID 35732327›Full record

ArticleCancer genomics & proteomics

Palmitoylation of the Alternative Amino Terminus of the BTK-C Isoform Controls Subcellular Distribution and Signaling.

Mostafa Kokabee, Xianhui Wang, Elena Voorand, Eden Alin, Leila Kokabee, Faiza Khan, Sophia Desrosiers, Douglas S Conklin

Open access · diamondAbstract read
In one paragraph

Article in Cancer genomics & proteomics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Mostafa KokabeeCancer Research Center and Department of Biomedical Sciences, State University of New York, University at Albany, Rensselaer, NY, U.S.A.
Xianhui WangCancer Research Center and Department of Biomedical Sciences, State University of New York, University at Albany, Rensselaer, NY, U.S.A.
Elena VoorandCancer Research Center and Department of Biomedical Sciences, State University of New York, University at Albany, Rensselaer, NY, U.S.A.
Eden AlinCancer Research Center and Department of Biomedical Sciences, State University of New York, University at Albany, Rensselaer, NY, U.S.A.
Leila KokabeeCancer Research Center and Department of Biomedical Sciences, State University of New York, University at Albany, Rensselaer, NY, U.S.A.
Faiza KhanCancer Research Center and Department of Biomedical Sciences, State University of New York, University at Albany, Rensselaer, NY, U.S.A.
Sophia DesrosiersCancer Research Center and Department of Biomedical Sciences, State University of New York, University at Albany, Rensselaer, NY, U.S.A.
Douglas S ConklinCancer Research Center and Department of Biomedical Sciences, State University of New York, University at Albany, Rensselaer, NY, U.S.A. dconklin@albany.edu.
University at Albany, State University of New York · USAlbany State University · US

Funding

NR1D1 pathway in breast cancerR01CA136658 · NCI · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI CONKLIN, DOUGLAS S. · 2009 to 2012
$1.2M
NCI NIH HHS R01 CA136658
6 · The paper itself

Abstract

backgroundThe alternative transcriptional isoform of Bruton's tyrosine kinase, BTK-C, is expressed in a wide variety of epithelial tumor types where it impacts apoptosis resistance, therapeutic escape, and glucose uptake. The initial exon in BTK-C encodes a 34 amino acid extension of the amino terminus of the canonical BTK-A isoform. Its function is unknown. MATERIALS AND

methodsSite-directed mutagenesis, acylation assays and expression studies in cancer cell lines were used to determine the effects that the BTK-C first exon sequence has on kinase activity, subcellular localization and cell physiology. Analysis of BTK-C expression in tumors was conducted using genomic databases.

resultsBTK-C is palmitoylated on two cysteine residues. BTK-C localization at the plasma membrane is dependent upon phosphatidylinositol 3,4,5-triphosphate (PIP

conclusionPalmitoylation affects localization and regulation of BTK-C in epithelial tumor cells where it functions as an important survival factor. Expression of either palmitoylated or non-palmitoylated kinase isoforms that function in PI3K signaling may be a common regulatory feature as nine other soluble kinases in the human genome possess similarly encoded alternative N-termini (ANT).

Indexed as

Agammaglobulinaemia Tyrosine KinaseBreast NeoplasmsNeoplasms, Glandular and EpithelialFemaleGlucoseHumansLipoylationPhosphatidylinositol 3-KinasesProtein IsoformsAgammaglobulinaemia Tyrosine KinaseBTK protein, humanGlucosePhosphatidylinositol 3-KinasesProtein Isoformsalternative N-terminusBTKEpithelial cancerspalmitoylationPI3K

Identifiers

PMID35732327
PMCPMC9247882
OpenAlexW4283389808

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.