Evidence map›Paper›PMID 35731870›Full record

ArticleScience advances2022

Mitonuclear genotype remodels the metabolic and microenvironmental landscape of Hürthle cell carcinoma.

Ian Ganly, Eric Minwei Liu, Fengshen Kuo, Vladimir Makarov, Yiyu Dong, Jinsung Park, Yongxing Gong, Alexander N Gorelick, Jeffrey A Knauf, Elisa Benedetti and 10 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 2 countries.

Ian GanlyHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0001-7636-5426
Eric Minwei LiuComputational Oncology Service, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-3594-6678
Fengshen KuoHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0003-1797-2896
Vladimir MakarovLerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.ORCID 0000-0002-4104-5876
Yiyu DongHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-5391-4936
Jinsung ParkHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-5224-7377
Yongxing GongHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0003-1071-0375
Alexander N GorelickMarie-Josée and Henry R. Kravis Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0001-6736-8246
Jeffrey A KnaufLerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.ORCID 0000-0003-4456-8792
Elisa BenedettiDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.ORCID 0000-0003-4616-3860
Jacqueline Tait-MulderCRUK Beatson Institute, Glasgow, UK.
Luc G T MorrisHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-4417-2280
James A FaginHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-2365-2517
Andrew M IntlekoferHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0001-9046-6549
Jan KrumsiekDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.ORCID 0000-0003-4734-3791
Payam A GammageCRUK Beatson Institute, Glasgow, UK.ORCID 0000-0003-1968-1726
Ronald GhosseinDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Bin XuDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0003-4638-9835
Timothy A ChanLerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.ORCID 0000-0002-9265-0283
Ed ReznikComputational Oncology Service, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-6511-5947
Memorial Sloan Kettering Cancer Center · USCleveland Clinic Lerner College of Medicine · USCancer Research UK Scotland Institute · GBCornell University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
SPORE in Thyroid CancerP50CA172012 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI FAGIN, JAMES A · 2014 to 2018
$10.3M
TOWARDS PRECISION IMMUNO-ONCOLOGY: UNRAVELING THE GENOMIC DETERMINANTS AND MECHANISMS UNDERLYING IMMUNOTHERAPY EFFICACY AND RESISTANCER35CA232097 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI CHAN, TIMOTHY AN-THY · 2018 to 2024
$7.0M
Metabolic control of normal and malignant hematopoiesisR37CA251543 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI INTLEKOFER, ANDREW MICHAEL · 2020 to 2025
$3.4M
NCI NIH HHS P30 CA008748NCI NIH HHS P50 CA172012NCI NIH HHS R35 CA232097NCI NIH HHS R37 CA251543
6 · The paper itself

Abstract

Hürthle cell carcinomas (HCCs) display two exceptional genotypes: near-homoplasmic mutation of mitochondrial DNA (mtDNA) and genome-wide loss of heterozygosity (gLOH). To understand the phenotypic consequences of these genetic alterations, we analyzed genomic, metabolomic, and immunophenotypic data of HCC and other thyroid cancers. Both mtDNA mutations and profound depletion of citrate pools are common in HCC and other thyroid malignancies, suggesting that thyroid cancers are broadly equipped to survive tricarboxylic acid cycle impairment, whereas metabolites in the reduced form of NADH-dependent lysine degradation pathway were elevated exclusively in HCC. The presence of gLOH was not associated with metabolic phenotypes but rather with reduced immune infiltration, indicating that gLOH confers a selective advantage partially through immunosuppression. Unsupervised multimodal clustering revealed four clusters of HCC with distinct clinical, metabolomic, and microenvironmental phenotypes but overlapping genotypes. These findings chart the metabolic and microenvironmental landscape of HCC and shed light on the interaction between genotype, metabolism, and the microenvironment in cancer.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsThyroid NeoplasmsDNA, MitochondrialGenotypeHumansMutationOxyphil CellsTumor MicroenvironmentDNA, Mitochondrial

Identifiers

PMID35731870
PMCPMC9216518
OpenAlexW4283268435

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.