Evidence map›Paper›PMID 35731846›Full record

ArticleMolecular biology and evolution2022

Simplexviruses Successfully Adapt to Their Host by Fine-Tuning Immune Responses.

Alessandra Mozzi, Rachele Cagliani, Chiara Pontremoli, Diego Forni, Irma Saulle, Marina Saresella, Uberto Pozzoli, Gioia Cappelletti, Chiara Vantaggiato, Mario Clerici and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecular biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Alessandra MozziScientific Institute, IRCCS E. MEDEA, Bioinformatics, 23842 Bosisio Parini, Italy.ORCID 0000-0003-3911-1042
Rachele CaglianiScientific Institute, IRCCS E. MEDEA, Bioinformatics, 23842 Bosisio Parini, Italy.
Chiara PontremoliScientific Institute, IRCCS E. MEDEA, Bioinformatics, 23842 Bosisio Parini, Italy.ORCID 0000-0002-3022-502X
Diego ForniScientific Institute, IRCCS E. MEDEA, Bioinformatics, 23842 Bosisio Parini, Italy.
Irma SaulleDepartment of Biomedical and Clinical Sciences "L. Sacco", University of Milan, 20157 Milan, Italy.
Marina SaresellaDon C. Gnocchi Foundation ONLUS, IRCCS, Laboratory of Molecular Medicine and Biotechnology, 20148 Milan, Italy.
Uberto PozzoliScientific Institute, IRCCS E. MEDEA, Bioinformatics, 23842 Bosisio Parini, Italy.
Gioia CappellettiDepartment of Biomedical and Clinical Sciences "L. Sacco", University of Milan, 20157 Milan, Italy.
Chiara VantaggiatoScientific Institute, IRCCS E. MEDEA, Laboratory of Molecular Biology, 23842 Bosisio Parini, Italy.
Mario ClericiDepartment of Physiopathology and Transplantation, University of Milan, 20090 Milan, Italy.
Mara BiasinDepartment of Biomedical and Clinical Sciences "L. Sacco", University of Milan, 20157 Milan, Italy.
Manuela SironiScientific Institute, IRCCS E. MEDEA, Bioinformatics, 23842 Bosisio Parini, Italy.ORCID 0000-0002-2267-5266
IRCCS Eugenio Medea · ITUniversity of Milan · ITDon Carlo Gnocchi Foundation · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Primate herpes simplex viruses are species-specific and relatively harmless to their natural hosts. However, cross-species transmission is often associated with severe disease, as exemplified by the virulence of macacine herpesvirus 1 (B virus) in humans. We performed a genome-wide scan for signals of adaptation of simplexviruses to their hominin hosts. Among core genes, we found evidence of episodic positive selection in three glycoproteins, with several selected sites located in antigenic determinants. Positively selected noncore genes were found to be involved in different immune-escape mechanisms. The herpes simplex virus (HSV)-1/HSV-2 encoded product (ICP47) of one of these genes is known to down-modulate major histocompatibility complex class I expression. This feature is not shared with B virus, which instead up-regulates Human Leukocyte Antigen (HLA)-G, an immunomodulatory molecule. By in vitro expression of different ICP47 mutants, we functionally characterized the selection signals. Results indicated that the selected sites do not represent the sole determinants of binding to the transporter associated with antigen processing (TAP). Conversely, the amino acid status at these sites was sufficient to determine HLA-G up-regulation. In fact, both HSV-1 and HSV-2 ICP47 induced HLA-G when mutated to recapitulate residues in B virus, whereas the mutated version of B virus ICP47 failed to determine HLA-G expression. These differences might contribute to the severity of B virus infection in humans. Importantly, they indicate that the evolution of ICP47 in HSV-1/HSV-2 led to the loss of an immunosuppressive effect. Thus, related simplexviruses finely tune the balance between immunosuppressive and immunostimulatory pathways to promote successful co-existence with their primate hosts.

Indexed as

Herpesvirus 1, HumanImmediate-Early ProteinsAnimalsAntigen PresentationHerpesvirus 2, HumanHLA-G AntigensHumansViral ProteinsHLA-G AntigensImmediate-Early ProteinsViral ProteinsHLA-ABCHLA-Ghuman herpesvirusesICP47macacine herpesviruspositive selection

Identifiers

PMID35731846
PMCPMC9250107
OpenAlexW4283270695

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.