Evidence map›Paper›PMID 35731824›Full record

ArticlePLoS pathogens2022

Cbp1, a fungal virulence factor under positive selection, forms an effector complex that drives macrophage lysis.

Dinara Azimova, Nadia Herrera, Lucian Duvenage, Mark Voorhies, Rosa A Rodriguez, Bevin C English, Jennifer C Hoving, Oren Rosenberg, Anita Sil

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Tools for genetic manipulation of the endemic fungal pathogen,bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. mBio · 2025
    Article
  8. OptimizingmSphere · 2025
    Article
  9. The pathobiology of human fungal infections.Nature reviews. Microbiology · 2024
    Review
  10. Review
  11. Fungal effectors: past, present, and future.Current opinion in microbiology · 2024
    Review
  12. Review
  13. Genotypic diversity, virulence, and molecular genetic tools inMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  14. Common virulence factors betweenCurrent research in microbial sciences · 2024
    Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Dinara AzimovaUniversity of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0001-8599-6529
Nadia HerreraUniversity of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0003-4157-9429
Lucian DuvenageAFRICA Medical Mycology Research Unit, Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Cape Town, South Africa.ORCID 0000-0001-8173-4644
Mark VoorhiesUniversity of California San Francisco, San Francisco, California, United States of America.
Rosa A RodriguezUniversity of California San Francisco, San Francisco, California, United States of America.
Bevin C EnglishUniversity of California Davis, Davis, California, United States of America.ORCID 0000-0003-4531-8808
Jennifer C HovingAFRICA Medical Mycology Research Unit, Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Oren RosenbergUniversity of California San Francisco, San Francisco, California, United States of America.
Anita SilUniversity of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0002-3987-7534
University of California, San Francisco · USUniversity of Cape Town · ZAUniversity of California, Davis · US

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI PAUL David ADAMS, Gregory L Hura · 2017 to 2026
$28.6M
MUTIDISCIPLINARY TRAINING PROGRAM IN LUNG DISEASEST32HL007185 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI David J Erle, LAURENCE HUANG · 1985 to 2026
$24.6M
Microbial Pathogenesis and Host DefenseT32AI060537 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joanne N. Engel · 2004 to 2026
$6.5M
Gene circuits that control morphology in HistoplasmaR37AI066224 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Anita Sil · 2020 to 2026
$3.3M
Eliminating Critical Systematic Errors In Structural Biology With Next-Generation SimulationR01GM124149 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HOLTON, JAMES M · 2017 to 2024
$2.5M
Elucidating the mechanism of macrophage death during infection with the AIDS-associated opportunistic pathogen Histoplasma capsulatumR01AI136735 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SIL, ANITA · 2018 to 2021
$2.2M
Protein secretion in bacterial pathogensR01AI128214 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GROSS, CAROL ANNE · 2017 to 2021
$2.0M
Medical Research Council MR/V033417/1NHLBI NIH HHS T32 HL007185NIAID NIH HHS R01 AI128214NIAID NIH HHS R01 AI136735NIAID NIH HHS R37 AI066224NIAID NIH HHS T32 AI060537NIGMS NIH HHS P30 GM124169NIGMS NIH HHS R01 GM124149Wellcome TrustWellcome Trust 209293
6 · The paper itself

Abstract

Intracellular pathogens secrete effectors to manipulate their host cells. Histoplasma capsulatum (Hc) is a fungal intracellular pathogen of humans that grows in a yeast form in the host. Hc yeasts are phagocytosed by macrophages, where fungal intracellular replication precedes macrophage lysis. The most abundant virulence factor secreted by Hc yeast cells is Calcium Binding Protein 1 (Cbp1), which is absolutely required for macrophage lysis. Here we take an evolutionary, structural, and cell biological approach to understand Cbp1 function. We find that Cbp1 is present only in the genomes of closely related dimorphic fungal species of the Ajellomycetaceae family that lead primarily intracellular lifestyles in their mammalian hosts (Histoplasma, Paracoccidioides, and Emergomyces), but not conserved in the extracellular fungal pathogen Blastomyces dermatitidis. We observe a high rate of fixation of non-synonymous substitutions in the Cbp1 coding sequences, indicating that Cbp1 is under positive selection. We determine the de novo structures of Hc H88 Cbp1 and the Paracoccidioides americana (Pb03) Cbp1, revealing a novel "binocular" fold consisting of a helical dimer arrangement wherein two helices from each monomer contribute to a four-helix bundle. In contrast to Pb03 Cbp1, we show that Emergomyces Cbp1 orthologs are unable to stimulate macrophage lysis when expressed in the Hc cbp1 mutant. Consistent with this result, we find that wild-type Emergomyces africanus yeast are able to grow within primary macrophages but are incapable of lysing them. Finally, we use subcellular fractionation of infected macrophages and indirect immunofluorescence to show that Cbp1 localizes to the macrophage cytosol during Hc infection, making this the first instance of a phagosomal human fungal pathogen directing an effector into the cytosol of the host cell. We additionally show that Cbp1 forms a complex with Yps-3, another known Hc virulence factor that accesses the cytosol. Taken together, these data imply that Cbp1 is a fungal virulence factor under positive selection that localizes to the cytosol to trigger host cell lysis.

Indexed as

Calcium-Binding ProteinsHistoplasmosisMacrophagesVirulence FactorsAnimalsFungal ProteinsHistoplasmaHumansMammalsSaccharomyces cerevisiaeCalcium-Binding ProteinsFungal ProteinsVirulence Factors

Identifiers

PMID35731824
PMCPMC9255746
OpenAlexW4283260025

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.