Evidence map›Paper›PMID 35731345›Full record

ArticleJournal of microbiology (Seoul, Korea)2022

Whole-genome sequencing analysis of Shiga toxin-producing Escherichia coli O22:H8 isolated from cattle prediction pathogenesis and colonization factors and position in STEC universe phylogeny.

Wanderson Marques Da Silva, Mariano Larzabal, Flavia Figueira Aburjaile, Nahuel Riviere, Luisina Martorelli, James Bono, Ariel Amadio, Angel Cataldi

Abstract read
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In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Frontiers in microbiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Wanderson Marques Da SilvaAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, B1686IGC, Argentina. wanderson.marques1@gmail.com.
Mariano LarzabalAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, B1686IGC, Argentina.
Flavia Figueira AburjaileInstitute of Biological Sciences, Federal University of Minas Gerais (UFMG), Belo Horizonte, 31270-901, Brazil.
Nahuel RiviereAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, B1686IGC, Argentina.
Luisina MartorelliInstitute of Veterinary Pathobiology (IPEVET-INTA/CONICET), Hurlingham, B1686WAA, Argentina.
James BonoAgricultural Research Service, U.S. Department of Agriculture, U.S. Meat Animal Research Center, Clay Center, Nebraska, 68933, USA.
Ariel AmadioDairy Chain Research Institute (IDICAL-INTA/CONICET), Rafaela 2300, Santa Fe, S2300, Argentina.
Angel CataldiAgrobiotechnology and Molecular Biology Institute (IABIMO-INTA/CONICET), Hurlingham, B1686IGC, Argentina.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shiga toxin-producing Escherichia coli (STEC) is a foodborne pathogen capable of causing illness in humans. In a previous study, our group showed that a STEC isolate belonging to O22:H8 serotype (strain 154) can interfere with STEC O157:H7 colonization both in vitro and in vivo. Using whole-genome sequencing and genomic comparative, we predicted a subset of genes acquired by O22:H8 strain 154 through horizontal gene transfer that might be responsible for the phenotype previously described by our group. Among them were identified genes related to the pathogenesis of non-LEE (locus of enterocyte effacement) STEC, specific metabolic processes, antibiotic resistance and genes encoding for the T6SS-1 that is related to inter-bacterial competition. In addition, we showed that this strain carries stx1c and stx2d

Indexed as

Escherichia coli InfectionsEscherichia coli ProteinsShiga-Toxigenic Escherichia coliAnimalsCattlePhylogenyShiga ToxinVirulence FactorsEscherichia coli ProteinsShiga ToxinVirulence Factorsbacterial genomefoodborne pathogengenomic islandnon-LEE STECnon-O157pangenomeT6SS

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.