Evidence map›Paper›PMID 35730934›Full record

ArticlemSphere2022

Bacterial Community Assembly, Succession, and Metabolic Function during Outdoor Cultivation of

Megan M Morris, Jeffrey A Kimbrel, Haifeng Geng, Mary Bao Tran-Gyamfi, Eizadora T Yu, Kenneth L Sale, Todd W Lane, Xavier Mayali

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Megan M MorrisPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratorygrid.250008.f, Livermore, California, USA.ORCID 0000-0002-7024-8234
Jeffrey A KimbrelPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratorygrid.250008.f, Livermore, California, USA.
Haifeng GengDepartment of Systems Biology, Sandia National Laboratories, Livermore, California, USA.
Mary Bao Tran-GyamfiDepartment of Computational Biology and Biophysics, Sandia National Laboratories, Livermore, California, USA.
Eizadora T YuDepartment of Systems Biology, Sandia National Laboratories, Livermore, California, USA.
Kenneth L SaleDepartment of Computational Biology and Biophysics, Sandia National Laboratories, Livermore, California, USA.ORCID 0000-0002-4269-8940
Todd W LaneDepartment of Systems Biology, Sandia National Laboratories, Livermore, California, USA.
Xavier MayaliPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratorygrid.250008.f, Livermore, California, USA.ORCID 0000-0002-2170-0773
Sandia National Laboratories California · USLawrence Livermore National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Outdoor cultivation of microalgae has promising potential for renewable bioenergy, but there is a knowledge gap on the structure and function of the algal microbiome that coinhabits these ecosystems. Here, we describe the assembly mechanisms, taxonomic structure, and metabolic potential of bacteria associated with Microchloropsis salina cultivated outdoors. Open mesocosms were inoculated with algal cultures that were either free of bacteria or coincubated with one of two different strains of alga-associated bacteria and were sampled across five time points taken over multiple harvesting rounds of a 40-day experiment. Using quantitative analyses of metagenome-assembled genomes (MAGs), we tracked bacterial community compositional abundance and taxon-specific functional capacity involved in algal-bacterial interactions. One of the inoculated bacteria (

Indexed as

BiofuelsMicrobiotaBiomassMetagenomeSymbiosisBiofuelsalgal-bacterial interactionscommunity assemblymetagenome-assembled genomesMicrochloropsisRhodobacteraceae

Identifiers

PMID35730934
PMCPMC9429889
OpenAlexW4283321088

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.