Evidence map›Paper›PMID 35727138›Full record

ArticleeLife2022

Vision-related convergent gene losses reveal

Henrike Indrischek, Juliane Hammer, Anja Machate, Nikolai Hecker, Bogdan Kirilenko, Juliana Roscito, Stefan Hans, Caren Norden, Michael Brand, Michael Hiller

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Ocular Lymphatics in Health and Disease.Diagnostics (Basel, Switzerland) · 2026
    Review
  6. Review
  7. Linking phenotype to genotype using comprehensive genomic comparisons.Current opinion in genetics & development · 2025
    Review
  8. Article
  9. Gene loss and relaxed selection ofProceedings. Biological sciences · 2024
    Article
  10. Article
  11. Gene loss and relaxed selection ofbioRxiv : the preprint server for biology · 2023
    Article
  12. Decay of Skin-Specific Gene Modules in Pangolins.Journal of molecular evolution · 2023
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Henrike IndrischekSenckenberg Research Institute, Frankfurt, Germany.ORCID 0000-0002-2810-5272
Juliane HammerCenter for Regenerative Therapies Dresden, TU Dresden, Dresden, Germany.ORCID 0000-0003-2511-9537
Anja MachateCenter for Regenerative Therapies Dresden, TU Dresden, Dresden, Germany.
Nikolai HeckerMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0003-1693-4257
Bogdan KirilenkoSenckenberg Research Institute, Frankfurt, Germany.
Juliana RoscitoMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.
Stefan HansCenter for Regenerative Therapies Dresden, TU Dresden, Dresden, Germany.
Caren NordenMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0001-8835-1451
Michael BrandCenter for Regenerative Therapies Dresden, TU Dresden, Dresden, Germany.ORCID 0000-0001-5711-6512
Michael HillerSenckenberg Research Institute, Frankfurt, Germany.ORCID 0000-0003-3024-1449
Technische Universität Dresden · DEGoethe University Frankfurt · DEMax Planck Institute for the Physics of Complex Systems · DEMax Planck Institute of Molecular Cell Biology and Genetics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite decades of research, knowledge about the genes that are important for development and function of the mammalian eye and are involved in human eye disorders remains incomplete. During mammalian evolution, mammals that naturally exhibit poor vision or regressive eye phenotypes have independently lost many eye-related genes. This provides an opportunity to predict novel eye-related genes based on specific evolutionary gene loss signatures. Building on these observations, we performed a genome-wide screen across 49 mammals for functionally uncharacterized genes that are preferentially lost in species exhibiting lower visual acuity values. The screen uncovered several genes, including

Indexed as

Eye ProteinsVision, OcularAnimalsBlindnessGenomeHumansMammalsMiceRetinaVision DisordersZebrafishZebrafish ProteinsEye ProteinsZebrafish Proteinsconvergent gene lossevolutionary biologygeneticsgenomicsmouseserine proteinase inhibitorvertebrate evolutionvisual acuityzebrafish

Identifiers

PMID35727138
PMCPMC9355568
OpenAlexW4283271507

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.