Evidence map›Paper›PMID 35725777›Full record

ArticleNature microbiology2022

Characterization of inositol lipid metabolism in gut-associated Bacteroidetes.

Stacey L Heaver, Henry H Le, Peijun Tang, Arnaud Baslé, Claudia Mirretta Barone, Dai Long Vu, Jillian L Waters, Jon Marles-Wright, Elizabeth L Johnson, Dominic J Campopiano and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Nature microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 47 citations in OpenAlex.

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  16. Disorder-to-order active site capping regulates the rate-limiting step of the inositol pathway.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  17. Review
  18. Microorganisms · 2024
    Article
  19. mBio · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Stacey L HeaverDepartment of Microbiome Science, Max Planck Institute for Biology Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0003-4570-8371
Henry H LeDivision of Nutritional Sciences, Cornell University, Ithaca, NY, USA.ORCID http://orcid.org/0000-0003-2942-2357
Peijun TangSchool of Chemistry, University of Edinburgh, Edinburgh, Scotland, UK.
Arnaud BasléNewcastle University Biosciences Institute, Newcastle University, Newcastle-upon-Tyne, UK.
Claudia Mirretta BaroneDepartment of Microbiome Science, Max Planck Institute for Biology Tübingen, Tübingen, Germany.
Dai Long VuMass Spectrometry Facility, Max Planck Institute for Biology Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0002-1559-1531
Jillian L WatersDepartment of Microbiome Science, Max Planck Institute for Biology Tübingen, Tübingen, Germany.
Jon Marles-WrightNewcastle University Biosciences Institute, Newcastle University, Newcastle-upon-Tyne, UK.
Elizabeth L JohnsonDivision of Nutritional Sciences, Cornell University, Ithaca, NY, USA.ORCID http://orcid.org/0000-0002-8290-1122
Dominic J CampopianoSchool of Chemistry, University of Edinburgh, Edinburgh, Scotland, UK.ORCID http://orcid.org/0000-0001-8573-6735
Ruth E LeyDepartment of Microbiome Science, Max Planck Institute for Biology Tübingen, Tübingen, Germany. ruth.ley@tuebingen.mpg.de.ORCID http://orcid.org/0000-0002-9087-1672
Max Planck Institute for Biology · DECornell University · USNewcastle University · GBUniversity of Edinburgh · GB

Funding

National Glycoscience Resource- CCRC Service and Training - NGlycoR@CCRCR24GM137782 · NIGMS · UNIVERSITY OF GEORGIA · PI Parastoo Azadi · 2020 to 2026
$5.2M
Biotechnology and Biological Sciences Research Council BB/V001620/1Biotechnology and Biological Sciences Research Council BB/V00168X/1NIGMS NIH HHS R24 GM137782
6 · The paper itself

Abstract

Inositol lipids are ubiquitous in eukaryotes and have finely tuned roles in cellular signalling and membrane homoeostasis. In Bacteria, however, inositol lipid production is relatively rare. Recently, the prominent human gut bacterium Bacteroides thetaiotaomicron (BT) was reported to produce inositol lipids and sphingolipids, but the pathways remain ambiguous and their prevalence unclear. Here, using genomic and biochemical approaches, we investigated the gene cluster for inositol lipid synthesis in BT using a previously undescribed strain with inducible control of sphingolipid synthesis. We characterized the biosynthetic pathway from myo-inositol-phosphate (MIP) synthesis to phosphoinositol dihydroceramide, determined the crystal structure of the recombinant BT MIP synthase enzyme and identified the phosphatase responsible for the conversion of bacterially-derived phosphatidylinositol phosphate (PIP-DAG) to phosphatidylinositol (PI-DAG). In vitro, loss of inositol lipid production altered BT capsule expression and antimicrobial peptide resistance. In vivo, loss of inositol lipids decreased bacterial fitness in a gnotobiotic mouse model. We identified a second putative, previously undescribed pathway for bacterial PI-DAG synthesis without a PIP-DAG intermediate, common in Prevotella. Our results indicate that inositol sphingolipid production is widespread in host-associated Bacteroidetes and has implications for symbiosis.

Indexed as

Bacteroides thetaiotaomicronInositolAnimalsBacteriaBacteroidetesLipid MetabolismMicePhosphatidylinositolsSphingolipidsInositolPhosphatidylinositolsSphingolipids

Identifiers

PMID35725777
PMCPMC9246714
OpenAlexW4283168711

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.