Evidence map›Paper›PMID 35725445›Full record

ArticleBMC medical informatics and decision making2022

Discriminating TB lung nodules from early lung cancers using deep learning.

Heng Tan, Jason H T Bates, C Matthew Kinsey

Open access · goldAbstract read
In one paragraph

Article in BMC medical informatics and decision making, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Revolutionizing diagnosis of pulmonaryFrontiers in microbiology · 2024
    Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Heng TanDepartment of Medicine, Larner College of Medicine, University of Vermont, Burlington, VT, USA.
Jason H T BatesDepartment of Medicine, Larner College of Medicine, University of Vermont, Burlington, VT, USA.
C Matthew KinseyDepartment of Medicine, Larner College of Medicine, University of Vermont, Burlington, VT, USA. matt.kinsey@med.uvm.edu.
University of Vermont · US

Funding

VERMONT IMMUNOBIOLOIGY/ INFECTIOUS DISEASES CENTERP20RR021905 · NCRR · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI MATRAJT, MARIANA L · 2006 to 2011
$14.5M
CT Characteristics of Emphysema for Evaluation of Pulmonary NodulesK23HL133476 · NHLBI · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI KINSEY, CHARLES MATTHEW · 2016 to 2021
$933k
NCRR NIH HHS P20 RR021905NHLBI NIH HHS K23 HL133476
6 · The paper itself

Abstract

backgroundIn developing countries where both high rates of smoking and endemic tuberculosis (TB) are often present, identification of early lung cancer can be significantly confounded by the presence of nodules such as those due to latent TB (LTB). It is very challenging to distinguish lung cancer and LTB without invasive procedures, which have their own risks of morbidity and even mortality.

methodsOur method uses a customized VGG16-based 15-layer 2-dimensional deep convolutional neural network (DNN) architecture with transfer learning. The DNN was trained and tested on sets of CT images set extracted from the National Lung Screening Trial and the National Institute of Allergy and Infectious Disease TB Portals. Performance of the DNN was evaluated under locked and step-wise unlocked pretrained weight conditions.

resultsThe DNN with unlocked pretrained weights achieved an accuracy of 90.4% with an F score of 90.1%.

conclusionsOur findings support the potential for a DNN to serve as a noninvasive screening tool capable of reliably detecting and distinguishing between lung cancer and LTB.

Indexed as

Deep LearningLung NeoplasmsTuberculosisHumansLungNeural Networks, ComputerDeep learningLatent TBLung cancer

Identifiers

PMID35725445
PMCPMC9210663
OpenAlexW4283208879

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.