Evidence map›Paper›PMID 35723575›Full record

ArticleeLife2022

Comprehensive fitness landscape of SARS-CoV-2 M

Julia M Flynn, Neha Samant, Gily Schneider-Nachum, David T Barkan, Nese Kurt Yilmaz, Celia A Schiffer, Stephanie A Moquin, Dustin Dovala, Daniel N A Bolon

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 125 citations in OpenAlex.

  1. Review
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  11. Polaris Challenge: Data-Driven Priors to Improve Docking for Pose Prediction.Journal of chemical information and modeling · 2025
    Article
  12. Review
  13. Dissecting the effects of single amino acid substitutions in SARS-CoV-2 Mpro.Protein science : a publication of the Protein Society · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Julia M FlynnDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, United States.ORCID 0000-0002-5490-393X
Neha SamantDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, United States.ORCID 0000-0002-9514-0705
Gily Schneider-NachumDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, United States.ORCID 0000-0003-3028-350X
David T BarkanNovartis Institutes for Biomedical Research, Emeryville, United States.
Nese Kurt YilmazDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, United States.
Celia A SchifferDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, United States.ORCID 0000-0003-2270-6613
Stephanie A MoquinNovartis Institutes for Biomedical Research, Emeryville, United States.
Dustin DovalaNovartis Institutes for Biomedical Research, Emeryville, United States.
Daniel N A BolonDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, United States.ORCID 0000-0001-5857-6676
University of Massachusetts Chan Medical School · USNovartis (Switzerland) · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With the continual evolution of new strains of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) that are more virulent, transmissible, and able to evade current vaccines, there is an urgent need for effective anti-viral drugs. The SARS-CoV-2 main protease (M

Indexed as

COVID-19 Drug TreatmentSARS-CoV-2Antiviral AgentsCysteine EndopeptidasesHumansProtease InhibitorsSaccharomyces cerevisiaeViral Nonstructural ProteinsAntiviral AgentsCysteine EndopeptidasesProtease InhibitorsViral Nonstructural Proteinsdeep mutational scanningevolutionary biologyinfectious diseasemain proteasemicrobiologyMproSARS-CoV-2S. cerevisiae

Identifiers

PMID35723575
PMCPMC9323007
OpenAlexW4283161447

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.