Evidence map›Paper›PMID 35723402›Full record

ArticleCurrent issues in molecular biology2022

Multi-Omics Integration and Network Analysis Reveal Potential Hub Genes and Genetic Mechanisms Regulating Bovine Mastitis.

Masoumeh Naserkheil, Farzad Ghafouri, Sonia Zakizadeh, Nasrollah Pirany, Zeinab Manzari, Sholeh Ghorbani, Mohammad Hossein Banabazi, Mohammad Reza Bakhtiarizadeh, Md Amdadul Huq, Mi Na Park and 3 more

Open access · goldAbstract read
In one paragraph

Article in Current issues in molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Masoumeh NaserkheilAnimal Breeding and Genetics Division, National Institute of Animal Science, Cheonan-si 31000, Korea.
Farzad GhafouriDepartment of Animal Science, University College of Agriculture and Natural Resources, University of Tehran, Karaj 77871-31587, Iran.ORCID 0000-0002-0010-0111
Sonia ZakizadehAnimal Genetics and Breeding Division, Animal Science Research Institute of Iran, Agriculture Research, Education, and Extension Organization, Karaj 31466-18361, Iran.ORCID 0000-0002-1840-5132
Nasrollah PiranyDepartment of Animal Science, Shahrekord University, Shahrekord 88186-34141, Iran.
Zeinab ManzariDepartment of Animal Science, University College of Agriculture and Natural Resources, University of Tehran, Karaj 77871-31587, Iran.
Sholeh GhorbaniAnimal Genetics and Breeding Division, Animal Science Research Institute of Iran, Agriculture Research, Education, and Extension Organization, Karaj 31466-18361, Iran.
Mohammad Hossein BanabaziAnimal Genetics and Breeding Division, Animal Science Research Institute of Iran, Agriculture Research, Education, and Extension Organization, Karaj 31466-18361, Iran.
Mohammad Reza BakhtiarizadehDepartment of Animal and Poultry Science, College of Aburaihan, University of Tehran, Tehran 33916-53775, Iran.ORCID 0000-0001-5336-6987
Md Amdadul HuqDepartment of Food and Nutrition, College of Biotechnology and Natural Resource, Chung-Ang University, Anseong-si 17546, Korea.ORCID 0000-0002-4831-6368
Mi Na ParkAnimal Breeding and Genetics Division, National Institute of Animal Science, Cheonan-si 31000, Korea.
Herman W BarkemaDepartment of Production Animal Health, Faculty of Veterinary Medicine, University of Calgary, Calgary, AB T2N 4N1, Canada.ORCID 0000-0002-9678-8378
Deukmin LeeDepartment of Animal Life and Environment Sciences, Hankyong National University, Jungang-ro 327, Anseong-si 17579, Korea.ORCID 0000-0001-7993-9966
Kwan-Sik MinDepartment of Animal Life and Environment Sciences, Hankyong National University, Jungang-ro 327, Anseong-si 17579, Korea.ORCID 0000-0002-5451-3085
University of Tehran · IRHankyong National University · KRNational Institute of Animal Science · KRChung-Ang University · KRShahrekord University · IRUniversity of Calgary · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mastitis, inflammation of the mammary gland, is the most prevalent disease in dairy cattle that has a potential impact on profitability and animal welfare. Specifically designed multi-omics studies can be used to prioritize candidate genes and identify biomarkers and the molecular mechanisms underlying mastitis in dairy cattle. Hence, the present study aimed to explore the genetic basis of bovine mastitis by integrating microarray and RNA-Seq data containing healthy and mastitic samples in comparative transcriptome analysis with the results of published genome-wide association studies (GWAS) using a literature mining approach. The integration of different information sources resulted in the identification of 33 common and relevant genes associated with bovine mastitis. Among these, seven genes-

Indexed as

bovinehub genesmastitismulti-omics dataregulatory networkstranscriptome sequencing

Identifiers

PMID35723402
PMCPMC8928958
OpenAlexW4206474394

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.