Evidence map›Paper›PMID 35719031›Full record

ArticleBioEssays : news and reviews in molecular, cellular and developmental biology2022

Druggable differences: Targeting mechanistic differences between trans-translation and translation for selective antibiotic action.

Pooja Srinivas, Kenneth C Keiler, Christine M Dunham

Open access · greenAbstract read
In one paragraph

Article in BioEssays : news and reviews in molecular, cellular and developmental biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Collided ribosomes are rescued by the endonuclease Rae1 andbioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Ribosomal Protein bL27 Protects Translating Ribosomes from tmRNA-SmpB.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. The Structural and Molecular Mechanisms ofMolecules (Basel, Switzerland) · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Pooja SrinivasDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Kenneth C KeilerDepartment of Biochemistry & Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0001-8753-335X
Christine M DunhamDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
Emory University · USPennsylvania State University · US

Funding

Physiology of ribosome rescue in bacteriaR01GM121650 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI KEILER, KENNETH C · 2017 to 2025
$3.8M
Targeting trans-translation to kill M. tuberculosis non-replicating persister cellsR01AI158706 · NIAID · UNIVERSITY OF TEXAS AT AUSTIN · PI ANTHONY D BAUGHN, Kenneth C Keiler · 2022 to 2026
$3.4M
Division of Intramural Research, National Institute of Allergy and Infectious Diseases T32AI106699NIAID NIH HHS R01 AI158706NIGMS NIH HHS R01 GM121650
6 · The paper itself

Abstract

Bacteria use trans-translation to rescue stalled ribosomes and target incomplete proteins for proteolysis. Despite similarities between tRNAs and transfer-messenger RNA (tmRNA), the key molecule for trans-translation, new structural and biochemical data show important differences between translation and trans-translation at most steps of the pathways. tmRNA and its binding partner, SmpB, bind in the A site of the ribosome but do not trigger the same movements of nucleotides in the rRNA that are required for codon recognition by tRNA. tmRNA-SmpB moves from the A site to the P site of the ribosome without subunit rotation to generate hybrid states, and moves from the P site to a site outside the ribosome instead of to the E site. During catalysis, transpeptidation to tmRNA appears to require the ribosomal protein bL27, which is dispensable for translation, suggesting that this protein may be conserved in bacteria due to trans-translation. These differences provide insights into the fundamental nature of trans-translation, and provide targets for new antibiotics that may have decrease cross-reactivity with eukaryotic ribosomes.

Indexed as

Anti-Bacterial AgentsRNA-Binding ProteinsProtein BiosynthesisRibosomesRNA, TransferAnti-Bacterial AgentsRNA-Binding ProteinsRNA, Transferantibioticsprotein synthesisribosometmRNAtranslationtrans-translationtRNA

Identifiers

PMID35719031
PMCPMC9308750
OpenAlexW4283157441

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.