Evidence map›Paper›PMID 35717171›Full record

ArticleJournal of biomedical science2022

Human rs75776403 polymorphism links differential phenotypic and clinical outcomes to a CLEC18A p.T151M-driven multiomics.

Yu-Wen Hsu, Henry Sung-Ching Wong, Wan-Chen Huang, Yi-Hung Yeh, Chwan-Deng Hsiao, Wei-Chiao Chang, Shie-Liang Hsieh

Open access · diamondAbstract read
In one paragraph

Article in Journal of biomedical science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Yu-Wen HsuThe Ph.D. Program for Translational Medicine, College of Medical Science and Technology, Taipei Medical University and Academia Sinica, Taipei, Taiwan.
Henry Sung-Ching WongDepartment of Clinical Pharmacy, School of Pharmacy, Taipei Medical University, Taipei, Taiwan.
Wan-Chen HuangInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Yi-Hung YehInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Chwan-Deng HsiaoInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Wei-Chiao ChangDepartment of Clinical Pharmacy, School of Pharmacy, Taipei Medical University, Taipei, Taiwan. wcc@tmu.edu.tw.ORCID http://orcid.org/0000-0002-7693-5959
Shie-Liang HsiehGenomics Research Center, Academia Sinica, Taipei, Taiwan. slhsieh@gate.sinica.edu.tw.
Institute of Molecular Biology, Academia Sinica · TWTaipei Medical University · TWNational Taiwan University · TWNational Yang Ming Chiao Tung University · TWTaipei Medical University Hospital · TW

Funding

Academia Sinica 107-2101-01-18-03Academia Sinica 109-2101-01-19-20Academia Sinica AS-BRPT-110-02Academia Sinica AS-IA-109-L02Academia Sinica AS-TM-108-02-10Ministry of Science and Technology, Taiwan 110-2321-B-038-002-Establishing A Translational Female Cancer Biomedical Big Data BankMinistry of Science and Technology, Taiwan MOST 107-2321-B-001-015VGH, TSGH and AS Joint Research Program VTA109-A-3-1
6 · The paper itself

Abstract

backgroundHuman traits, diseases susceptibility, and clinical outcomes vary hugely among individuals. Despite a fundamental understanding of genetic (or environmental) contributions, the detailed mechanisms of how genetic variation impacts molecular or cellular behaviours of a gene, and subsequently leads to such variability remain poorly understood.

methodsHere, in addition to phenome-wide correlations, we leveraged multiomics to exploit mechanistic links, from genetic polymorphism to protein structural or functional changes and a cross-omics perturbation landscape of a germline variant.

resultsWe identified a missense cis-acting expression quantitative trait locus in CLEC18A (rs75776403) in which the altered residue (T

conclusionsCollectively, we uncovered genetic pleiotropy in human complex traits and diseases via CLEC18A rs75776403-regulated pathways.

Indexed as

Genetic PleiotropyPolymorphism, GeneticAllelesGenome-Wide Association StudyHumansLectins, C-TypePhenotypePolymorphism, Single NucleotideCLEC18A protein, humanLectins, C-TypeBody heightCLEC18ACLEC18A p.T151MPhosphatidic acid (PA)Phosphatidylserine (PS)rs75776403Thyroid hormone

Identifiers

PMID35717171
PMCPMC9206359
OpenAlexW4283067909

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.