Evidence map›Paper›PMID 35716268›Full record

ArticleArchives of virology2022

Characterization and genome analysis of Pseudomonas aeruginosa phage vB_PaeP_Lx18 and the antibacterial activity of its lysozyme.

Yin Yin, Xinwei Wang, Zehua Mou, Huiying Ren, Can Zhang, Ling Zou, Huanqi Liu, Wenhua Liu, Zongzhu Liu

Abstract read
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In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Characterization ofFrontiers in microbiology · 2024
    Article
  10. Characterization of a lyticFrontiers in microbiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yin YinCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China.
Xinwei WangCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China.
Zehua MouCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China.
Huiying RenCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China.
Can ZhangCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China.
Ling ZouCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China.
Huanqi LiuCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China. huanqiliu@126.com.
Wenhua LiuCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China. wenhualiu2668@126.com.ORCID http://orcid.org/0000-0003-4896-3730
Zongzhu LiuCollege of Veterinary Medicine, Qingdao Agricultural University, Shandong, 266109, China.
Qingdao Agricultural University · CN

Funding

Shandong Province modern agricultural industrial technology system cattle industry innovation team project No. SDAIT-09-03
6 · The paper itself

Abstract

A lytic Pseudomonas aeruginosa phage, vB_PaeP_Lx18 (Lx18), was isolated from the sewage of a dairy farm. Biological characterization revealed that Lx18 was stable from 40 °C to 60 °C and over a wide range of pH values from 4 to 10. It was able to lyse 63.6% (21/33) of the P. aeruginosa strains tested and was able to reduce and disperse biofilms, with a biofilm reduction rate of 76.8%. Whole-genome sequencing showed that Lx18 is a dsDNA virus with a genome of 42,735 bp and G+C content of 62.16%. The genome contains 54 open reading frames (ORFs), 28 of which have known functions, including DNA replication and modification, transcriptional regulation, structural and packaging proteins, and host cell lysis. No virulence or tRNA genes were identified. Phylogenetic analysis showed that phage Lx18 belongs to the genus Phikmvvirus. The lysozyme of Lx18, Lys18, was cloned and expressed. The combined action of Lys18 and ethylenediaminetetraacetic acid (EDTA) had antibacterial activity against Pseudomonas aeruginosa. The study of phage Lx18 and its lysozyme will provide basic information for further research on the treatment of Pseudomonas aeruginosa infections.

Indexed as

BacteriophagesPodoviridaePseudomonas PhagesAnti-Bacterial AgentsGenome, ViralMuramidaseOpen Reading FramesPhylogenyPseudomonas aeruginosaAnti-Bacterial AgentsMuramidase

Identifiers

PMID35716268
OpenAlexW4283073678

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.