Evidence map›Paper›PMID 35716106›Full record

ArticleJournal of experimental botany2022

Loss of PROTEIN TARGETING TO STARCH 2 has variable effects on starch synthesis across organs and species.

Alexander Watson-Lazowski, Emma Raven, Doreen Feike, Lionel Hill, J Elaine Barclay, Alison M Smith, David Seung

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. FLOURY ENDOSPERM 6 mutations enhance the sugary phenotype caused by the loss of ISOAMYLASE1 in barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Alexander Watson-LazowskiJohn Innes Centre, Norwich Research Park, Norwich, UK.ORCID 0000-0002-2323-8287
Emma RavenJohn Innes Centre, Norwich Research Park, Norwich, UK.
Doreen FeikeJohn Innes Centre, Norwich Research Park, Norwich, UK.
Lionel HillJohn Innes Centre, Norwich Research Park, Norwich, UK.
J Elaine BarclayJohn Innes Centre, Norwich Research Park, Norwich, UK.
Alison M SmithJohn Innes Centre, Norwich Research Park, Norwich, UK.
David SeungJohn Innes Centre, Norwich Research Park, Norwich, UK.ORCID 0000-0003-3905-3647
John Innes Centre · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/00000020Biotechnology and Biological Sciences Research Council BBS/E/J/000PR9790Gatsby Foundation GAT3587Leverhulme Trust Research Project RPG-2019-095
6 · The paper itself

Abstract

Recent work has identified several proteins involved in starch granule initiation, the first step of starch synthesis. However, the degree of conservation in the granule initiation process remains poorly understood, especially among grass species differing in patterns of carbohydrate turnover in leaves, and granule morphology in the endosperm. We therefore compared mutant phenotypes of Hordeum vulgare (barley), Triticum turgidum (durum wheat), and Brachypodium distachyon defective in PROTEIN TARGETING TO STARCH 2 (PTST2), a key granule initiation protein. We report striking differences across species and organs. Loss of PTST2 from leaves resulted in fewer, larger starch granules per chloroplast and normal starch content in wheat, fewer granules per chloroplast and lower starch content in barley, and almost complete loss of starch in Brachypodium. The loss of starch in Brachypodium leaves was accompanied by high levels of ADP-glucose and detrimental effects on growth and physiology. Additionally, we found that loss of PTST2 increased granule initiation in Brachypodium amyloplasts, resulting in abnormal compound granule formation throughout the seed. These findings suggest that the importance of PTST2 varies greatly with the genetic and developmental background and inform the extent to which the gene can be targeted to improve starch in crops.

Indexed as

BrachypodiumHordeumStarch SynthaseAdenosine DiphosphateEndospermGlucoseStarchTriticumAdenosine DiphosphateGlucoseStarchStarch SynthaseBarleyBrachypodiumcarbohydrate metabolismPTST2starchstarch granule initiationwheat

Identifiers

PMID35716106
PMCPMC9578351
OpenAlexW4283069188

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.