Evidence map›Paper›PMID 35715831›Full record

ArticleBiological research2022

Characterization of metal(loid)s and antibiotic resistance in bacteria of human gut microbiota from chronic kidney disease subjects.

María V Miranda, Fernanda C González, Osvaldo S Paredes-Godoy, Mario A Maulén, Claudio C Vásquez, Waldo A Díaz-Vásquez

Open access · goldAbstract read
In one paragraph

Article in Biological research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

María V Miranda *Molecular microbiology and food research laboratory, Facultad de ciencias para el cuidado de la salud, Escuela de nutrición y dietética, Universidad San Sebastián, Carmen Sylva 2444, Providencia Santiago, Santiago, Chile.
Fernanda C González *Molecular microbiology and food research laboratory, Facultad de ciencias para el cuidado de la salud, Escuela de nutrición y dietética, Universidad San Sebastián, Carmen Sylva 2444, Providencia Santiago, Santiago, Chile.
Osvaldo S Paredes-GodoyMolecular microbiology and food research laboratory, Facultad de ciencias para el cuidado de la salud, Escuela de nutrición y dietética, Universidad San Sebastián, Carmen Sylva 2444, Providencia Santiago, Santiago, Chile.
Mario A MaulénMolecular microbiology and food research laboratory, Facultad de ciencias para el cuidado de la salud, Escuela de nutrición y dietética, Universidad San Sebastián, Carmen Sylva 2444, Providencia Santiago, Santiago, Chile.
Claudio C VásquezMolecular microbiology and food research laboratory, Facultad de ciencias para el cuidado de la salud, Escuela de nutrición y dietética, Universidad San Sebastián, Carmen Sylva 2444, Providencia Santiago, Santiago, Chile.
Waldo A Díaz-VásquezMolecular microbiology and food research laboratory, Facultad de ciencias para el cuidado de la salud, Escuela de nutrición y dietética, Universidad San Sebastián, Carmen Sylva 2444, Providencia Santiago, Santiago, Chile. waldo.diaz@uss.cl.ORCID http://orcid.org/0000-0002-3473-7540
San Sebastián University · CL

Funding

Agencia Nacional de Investigación y Desarrollo (CL) FONDECYT 11170885
6 · The paper itself

Abstract

backgroundHuman Gut Microbiota (HGM) is composed of more than one thousand species, playing an important role in the health status of individuals. Dysbiosis (an HGM imbalance) is augmented as chronic kidney disease (CKD) progresses, as loss of kidney function accelerates. Increased antibiotic use in CKD subjects and consumption of nephrotoxic heavy metals and metalloids such as lead, cadmium, arsenic, and mercury in tap water increases the dysbiosis state. Studies in people with stage 3 CKD are complex to carry out, mainly because patients are self-reliant who rarely consult a specialist. The current work focused on this type of patient.

resultsLead and arsenic-resistant bacteria were obtained from self-reliant (that stands on its own) stage 3 CKD subjects. Pathogen-related Firmicutes and Proteobacteria genus bacteria were observed. Resistance and potentiation of antibiotic effects in the presence of metal(loid)s in vitro were found. Furthermore, the presence of the following genes markers for antibiotic and metal(loid) resistance were identified by qPCR: oxa10, qnrB1, mphB, ermB, mefE1, arr2, sulll, tetA, floR, strB, dhfr1, acrB, cadA2k, cadA3k, arsC, pbrA. We observed a decrease in the number of metal resistance markers.

conclusionsThe presence of cadA and arsC genetic markers of antibiotics and metal(loid)s resistance were detected in samples from stage 3 CKD subjects. Lower gene amplification in advanced stages of CKD were also observed, possibly associated with a decrease in resident HGM during kidney disease progression.

Indexed as

ArsenicGastrointestinal MicrobiomeMetals, HeavyRenal Insufficiency, ChronicAnti-Bacterial AgentsBacteriaDrug Resistance, MicrobialDysbiosisHumansAnti-Bacterial AgentsArsenicMetals, Heavy

Identifiers

PMID35715831
PMCPMC9205139
OpenAlexW4283034307

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.