Evidence map›Paper›PMID 35715703›Full record

ArticleThe ISME journal2022

Endosymbiont population genomics sheds light on transmission mode, partner specificity, and stability of the scaly-foot snail holobiont.

Yi Lan, Jin Sun, Chong Chen, Hao Wang, Yao Xiao, Maeva Perez, Yi Yang, Yick Hang Kwan, Yanan Sun, Yadong Zhou and 7 more

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 5 countries.

Yi LanSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China.ORCID http://orcid.org/0000-0001-5501-1063
Jin SunInstitute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.ORCID http://orcid.org/0000-0001-8002-6881
Chong ChenX-STAR, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka, 237-0061, Kanagawa Prefecture, Japan.ORCID http://orcid.org/0000-0002-5035-4021
Hao WangSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China.
Yao XiaoSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China.
Maeva PerezDepartment of Biological Sciences, University of Montreal, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0003-4532-8299
Yi YangSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China.
Yick Hang KwanSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China.ORCID http://orcid.org/0000-0003-4107-5650
Yanan SunDepartment of Biology and Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Hong Kong Baptist University, Kowloon Tong, Hong Kong.
Yadong ZhouKey Laboratory of Marine Ecosystem Dynamics & Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, 310012, China.
Xiqiu HanKey Laboratory of Submarine Geosciences & Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, 310012, China.
Junichi MiyazakiX-STAR, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka, 237-0061, Kanagawa Prefecture, Japan.ORCID http://orcid.org/0000-0001-5394-5129
Tomo-O WatsujiDepartment of Food and Nutrition, Higashi-Chikushi Junior College, 5-1-1 Shimoitozu, Kitakyusyu, 803-0846, Japan.
Dass BissessurDepartment for Continental Shelf, Maritime Zones Administration & Exploration, Prime Minister's Office, 2nd Floor, Belmont House, 12 Intendance Street, Port Louis, 11328, Mauritius.
Jian-Wen QiuDepartment of Biology and Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Hong Kong Baptist University, Kowloon Tong, Hong Kong.ORCID http://orcid.org/0000-0002-1541-9627
Ken TakaiX-STAR, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka, 237-0061, Kanagawa Prefecture, Japan.ORCID http://orcid.org/0000-0003-4043-376X
Pei-Yuan QianSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China. boqianpy@ust.hk.ORCID http://orcid.org/0000-0003-4074-9078
Hong Kong University of Science and Technology · HKJapan Agency for Marine-Earth Science and Technology · JPHong Kong Baptist University · HKMinistry of Natural Resources · CNHigashi Chikushi Junior College · JPOcean University of China · CNPrime Minister's Office · BNUniversité de Montréal · CA

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 18K06401National Natural Science Foundation of China (National Science Foundation of China) 42176110
6 · The paper itself

Abstract

The scaly-foot snail (Chrysomallon squamiferum) inhabiting deep-sea hydrothermal vents in the Indian Ocean relies on its sulphur-oxidising gammaproteobacterial endosymbionts for nutrition and energy. In this study, we investigate the specificity, transmission mode, and stability of multiple scaly-foot snail populations dwelling in five vent fields with considerably disparate geological, physical and chemical environmental conditions. Results of population genomics analyses reveal an incongruent phylogeny between the endosymbiont and mitochondrial genomes of the scaly-foot snails in the five vent fields sampled, indicating that the hosts obtain endosymbionts via horizontal transmission in each generation. However, the genetic homogeneity of many symbiont populations implies that vertical transmission cannot be ruled out either. Fluorescence in situ hybridisation of ovarian tissue yields symbiont signals around the oocytes, suggesting that vertical transmission co-occurs with horizontal transmission. Results of in situ environmental measurements and gene expression analyses from in situ fixed samples show that the snail host buffers the differences in environmental conditions to provide the endosymbionts with a stable intracellular micro-environment, where the symbionts serve key metabolic functions and benefit from the host's cushion. The mixed transmission mode, symbiont specificity at the species level, and stable intracellular environment provided by the host support the evolutionary, ecological, and physiological success of scaly-foot snail holobionts in different vents with unique environmental parameters.

Indexed as

Hydrothermal VentsAnimalsMetagenomicsPhylogenySnailsSymbiosis

Identifiers

PMID35715703
PMCPMC9381778
OpenAlexW4283011420

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.