Evidence map›Paper›PMID 35715389›Full record

ArticleNature communications2022

Core and rod structures of a thermophilic cyanobacterial light-harvesting phycobilisome.

Keisuke Kawakami, Tasuku Hamaguchi, Yuu Hirose, Daisuke Kosumi, Makoto Miyata, Nobuo Kamiya, Koji Yonekura

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Structural insight of a photosystem I-CpcL-phycobilisome supercomplex from a cyanobacteriumProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Keisuke Kawakami *Biostructural Mechanism Laboratory, RIKEN SPring-8 Center, 1-1-1, Sayo, Hyogo, 679-5148, Japan. kawakami.k@spring8.or.jp.
Tasuku Hamaguchi *Biostructural Mechanism Laboratory, RIKEN SPring-8 Center, 1-1-1, Sayo, Hyogo, 679-5148, Japan.ORCID http://orcid.org/0000-0003-0876-7700
Yuu HiroseElectronics-Inspired Interdisciplinary Research Institute, Toyohashi University of Technology, 1-1 Tempaku, Toyohashi, Aichi, 441-8580, Japan.
Daisuke KosumiInstitute of Industrial Nanomaterials, Kumamoto University, Kumamoto, 860-8555, Japan.ORCID http://orcid.org/0000-0001-9339-7913
Makoto MiyataGraduate School of Science, Osaka Metropolitan University, Osaka, 558-8585, Japan.ORCID http://orcid.org/0000-0002-7478-7390
Nobuo KamiyaThe OCU Advanced Research Institute for Natural Science & Technology (OCARINA), Osaka Metropolitan University, Osaka, 558-8585, Japan.
Koji YonekuraBiostructural Mechanism Laboratory, RIKEN SPring-8 Center, 1-1-1, Sayo, Hyogo, 679-5148, Japan. yone@spring8.or.jp.ORCID http://orcid.org/0000-0001-5520-4391
Osaka Metropolitan University · JPSPring-8 · JPJEOL (Japan) · JPKumamoto Industrial Research Institute · JPToyohashi University of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyanobacteria, glaucophytes, and rhodophytes utilize giant, light-harvesting phycobilisomes (PBSs) for capturing solar energy and conveying it to photosynthetic reaction centers. PBSs are compositionally and structurally diverse, and exceedingly complex, all of which pose a challenge for a comprehensive understanding of their function. To date, three detailed architectures of PBSs by cryo-electron microscopy (cryo-EM) have been described: a hemiellipsoidal type, a block-type from rhodophytes, and a cyanobacterial hemidiscoidal-type. Here, we report cryo-EM structures of a pentacylindrical allophycocyanin core and phycocyanin-containing rod of a thermophilic cyanobacterial hemidiscoidal PBS. The structures define the spatial arrangement of protein subunits and chromophores, crucial for deciphering the energy transfer mechanism. They reveal how the pentacylindrical core is formed, identify key interactions between linker proteins and the bilin chromophores, and indicate pathways for unidirectional energy transfer.

Indexed as

CyanobacteriaRhodophytaCryoelectron MicroscopyEnergy TransferLight-Harvesting Protein ComplexesPhycobilisomesLight-Harvesting Protein ComplexesPhycobilisomes

Identifiers

PMID35715389
PMCPMC9205905
OpenAlexW4283009593

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.