Evidence map›Paper›PMID 35714188›Full record

ArticleScience advances2022

Amphotericin B assembles into seven-molecule ion channels: An NMR and molecular dynamics study.

Yuichi Umegawa, Tomoya Yamamoto, Mayank Dixit, Kosuke Funahashi, Sangjae Seo, Yasuo Nakagawa, Taiga Suzuki, Shigeru Matsuoka, Hiroshi Tsuchikawa, Shinya Hanashima and 4 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
6.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Article
  7. Targeting the polyene chain represents an adjuvant strategy for optimizing polyene antifungals.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Raman Imaging of an Amphotericin B Potentiator in Single-CellThe journal of physical chemistry. B · 2025
    Article
  13. Review
  14. Review
  15. Mono-Antibiotics (Basel, Switzerland) · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Yuichi UmegawaDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.ORCID 0000-0002-1057-8119
Tomoya YamamotoDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.ORCID 0000-0002-3284-5388
Mayank DixitDepartment of Materials Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.ORCID 0000-0003-2956-6756
Kosuke FunahashiDepartment of Materials Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.
Sangjae SeoDepartment of Materials Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.ORCID 0000-0002-3555-6223
Yasuo NakagawaDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
Taiga SuzukiDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
Shigeru MatsuokaDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.ORCID 0000-0002-4422-5389
Hiroshi TsuchikawaDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.ORCID 0000-0003-0554-2303
Shinya HanashimaDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.ORCID 0000-0003-3102-7890
Tohru OishiDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.ORCID 0000-0002-3057-9354
Nobuaki MatsumoriDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.ORCID 0000-0003-0495-2044
Wataru ShinodaDepartment of Materials Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.ORCID 0000-0002-3388-9227
Michio MurataDepartment of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.ORCID 0000-0002-1600-145X
The University of Osaka · JPNagoya University · JPJapan Science and Technology Agency · JPKyushu University · JPOkayama University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amphotericin B, an antifungal drug with a long history of use, forms fungicidal ion-permeable channels across cell membranes. Using solid-state nuclear magnetic resonance spectroscopy and molecular dynamics simulations, we experimentally elucidated the three-dimensional structure of the molecular assemblies formed by this drug in membranes in the presence of the fungal sterol ergosterol. A stable assembly consisting of seven drug molecules was observed to form an ion conductive channel. The structure is somewhat similar to the upper half of the barrel-stave model proposed in the 1970s but substantially different in the number of molecules and in their arrangement. The present structure explains many previous findings, including structure-activity relationships of the drug, which will be useful for improving drug efficacy and reducing adverse effects.

Identifiers

PMID35714188
PMCPMC9205587
OpenAlexW4283018830

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.