Evidence map›Paper›PMID 35712898›Full record

ArticleFEMS microbiology letters2022

The intestinal microbiota influences the microenvironment of metastatic colon cancer by targeting miRNAs.

Shihai Zhou, Canhua Zhu, Shaoqin Jin, Chunhui Cui, Linghui Xiao, Zhi Yang, Xi Wang, Jinlong Yu

Open access · hybridAbstract read
In one paragraph

Article in FEMS microbiology letters, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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  3. Article
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  6. Progress of Exosomal LncRNAs in Pancreatic Cancer.International journal of molecular sciences · 2024
    Review
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Shihai ZhouDepartment of General Surgery, Zhujiang Hospital of Southern Medical University, Guangzhou, 510000, China.
Canhua ZhuHepatobiliary Surgery Department, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong, 510120, China.
Shaoqin JinDepartment of General Surgery, Zhujiang Hospital of Southern Medical University, Guangzhou, 510000, China.
Chunhui CuiDepartment of General Surgery, Zhujiang Hospital of Southern Medical University, Guangzhou, 510000, China.
Linghui XiaoDepartment of Gastrointestinal Surgery, Huizhou First Hospital, Huizhou, Guangdong, 516003, China.
Zhi YangThe IVD Medical Marketing Department, 3D Medicines Inc., Shanghai, 201114, China.
Xi WangDepartment of Gastrointestinal Surgery, Huizhou First Hospital, Huizhou, Guangdong, 516003, China.
Jinlong YuDepartment of General Surgery, Zhujiang Hospital of Southern Medical University, Guangzhou, 510000, China.ORCID 0000-0002-4581-1726
Zhujiang Hospital · CNHuizhou Central People's Hospital · CNFirst Affiliated Hospital of Guangzhou Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aimed to investigate the molecular mechanisms through which the intestinal microbiota and microRNAs (miRNAs) participate in colon cancer metastasis. Intestinal flora data, and the GSE29621 (messenger RNA/long non-coding RNA [mRNA/lncRNA]) and GSE29622 (miRNA) datasets, were downloaded from The Cancer Gene Atlas and Gene Expression Omnibus databases, respectively. Immune-related cells in M1 vs. M0 samples were analyzed using the Wilcoxon test. Furthermore, an lncRNA-miRNA-mRNA (competing endogenous RNA [ceRNA]) network was constructed, and survival analysis of RNAs in the network was performed. A total of 16 miRNA-genus co-expression pairs containing eight microbial genera and 15 miRNAs were screened; notably, Porphyromonas and Bifidobacterium spp. were found to be associated with most miRNAs, and has-miR-3943 was targeted by most microbial genera. Furthermore, five immune cell types, including activated natural killer cells, M1 macrophages, resting mast cells, activated mast cells and neutrophils, were differentially accumulated between the M1 and M0 groups. Enrichment analysis suggested that mRNAs related to colon cancer metastasis were mainly involved in pathways related to bacterial and immune responses. Survival analysis revealed that TMEM176A and PALM3 in the ceRNA network were significantly associated with the prognosis of patients with colon cancer. In conclusion, this study revealed a potential mechanism by which the intestinal microbiota influences the colon cancer microenvironment by targeting miRNAs.

Indexed as

Colonic NeoplasmsGastrointestinal MicrobiomeMicroRNAsRNA, Long NoncodingGene Regulatory NetworksHumansMembrane ProteinsRNA, MessengerTumor MicroenvironmentMembrane ProteinsMicroRNAsRNA, Long NoncodingRNA, MessengerTMEM176A protein, humancolon cancerimmune cellsintestinal microbiotamiRNA

Identifiers

PMID35712898
PMCPMC9199189
OpenAlexW4225471062

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.