Evidence map›Paper›PMID 35710627›Full record

ArticleNPJ Regenerative medicine2022

Intestinal stem cell aging signature reveals a reprogramming strategy to enhance regenerative potential.

Christian M Nefzger, Thierry Jardé, Akanksha Srivastava, Jan Schroeder, Fernando J Rossello, Katja Horvay, Mirsada Prasko, Jacob M Paynter, Joseph Chen, Chen-Fang Weng and 15 more

Open access · goldAbstract read
In one paragraph

Article in NPJ Regenerative medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Age-Related Transcriptomic Changes in the Vermiform Appendix.International journal of molecular sciences · 2025
    Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Modeling Intestinal Carcinogenesis Using In Vitro Organoid Cultures.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 3 countries.

Christian M Nefzger *Department of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.ORCID http://orcid.org/0000-0003-4631-5633
Thierry Jardé *Department of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Akanksha SrivastavaAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, WA, Australia.
Jan SchroederDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.ORCID http://orcid.org/0000-0001-5270-0605
Fernando J RosselloDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Katja HorvayDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Mirsada PraskoDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Jacob M PaynterDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Joseph ChenDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Chen-Fang WengDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Yu B Y SunDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Xiaodong LiuDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Eva ChanDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.ORCID http://orcid.org/0000-0003-3996-4491
Nikita DeshpandeInstitute for Molecular Bioscience, University of Queensland, St Lucia, QLD, Australia.
Xiaoli ChenInstitute for Molecular Bioscience, University of Queensland, St Lucia, QLD, Australia.
Y Jinhua LiDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Jahnvi PfluegerAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, WA, Australia.
Rebekah M EngelDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Anja S KnauppDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.
Kirill TsyganovMonash Bioinformatics Platform, Monash University, Clayton, VIC, Australia.
Susan K NilssonAustralian Regenerative Medicine Institute, Monash University, Clayton, VIC, Australia.ORCID http://orcid.org/0000-0002-7926-7335
Ryan ListerAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, WA, Australia.
Owen J L RackhamProgram in Cardiovascular and Metabolic Disorders, Duke-National University of Singapore Medical School, Singapore, Singapore.
Helen E AbudDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia. helen.abud@monash.edu.ORCID http://orcid.org/0000-0003-3792-4023
Jose M PoloDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia. jose.polo@monash.edu.ORCID http://orcid.org/0000-0002-2531-778X
Australian Regenerative Medicine Institute · AUAustralian Research Council · AUMonash University · AUThe University of Queensland · AUDiscovery Institute · USCabrini Hospital · AUNational University of Singapore · SG

Funding

Department of Health | National Health and Medical Research Council (NHMRC) APP1061883Department of Health | National Health and Medical Research Council (NHMRC) APP1100531Department of Health | National Health and Medical Research Council (NHMRC) APP1129600Department of Health | National Health and Medical Research Council (NHMRC) APP1146623
6 · The paper itself

Abstract

The impact of aging on intestinal stem cells (ISCs) has not been fully elucidated. In this study, we identified widespread epigenetic and transcriptional alterations in old ISCs. Using a reprogramming algorithm, we identified a set of key transcription factors (Egr1, Irf1, FosB) that drives molecular and functional differences between old and young states. Overall, by dissecting the molecular signature of aged ISCs, our study identified transcription factors that enhance the regenerative capacity of ISCs.

Identifiers

PMID35710627
PMCPMC9203768
OpenAlexW4282981440

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.