Evidence map›Paper›PMID 35710619›Full record

ArticleNature chemical biology2022

Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota.

Ana S Luis, Arnaud Baslé, Dominic P Byrne, Gareth S A Wright, James A London, Chunsheng Jin, Niclas G Karlsson, Gunnar C Hansson, Patrick A Eyers, Mirjam Czjzek and 4 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Article
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  4. Review
  5. Defining substrate specificities ofOrganic chemistry frontiers : an international journal of organic chemistry · 2026
    Article
  6. Article
  7. Article
  8. Review
  9. Article
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  11. Lipidomics, Microbiota, and IntestinalInternational journal of molecular sciences · 2025
    Review
  12. Arylsulfamates inhibit colonic Bacteroidota growth through a sulfatase-independent mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
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  15. Article
  16. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 8 countries.

Ana S LuisDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA. ana.luis@medkem.gu.se.ORCID http://orcid.org/0000-0002-5086-7353
Arnaud BasléInstitute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, UK.
Dominic P ByrneDepartment of Biochemistry and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Gareth S A WrightDepartment of Biochemistry and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
James A LondonDepartment of Biochemistry and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Chunsheng JinDepartment of Medical Biochemistry and Cell Biology, University of Gothenburg, Gothenburg, Sweden.
Niclas G KarlssonDepartment of Medical Biochemistry and Cell Biology, University of Gothenburg, Gothenburg, Sweden.ORCID http://orcid.org/0000-0002-3045-2628
Gunnar C HanssonDepartment of Medical Biochemistry and Cell Biology, University of Gothenburg, Gothenburg, Sweden.ORCID http://orcid.org/0000-0002-1900-1869
Patrick A EyersDepartment of Biochemistry and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Mirjam CzjzekSorbonne Université, Univ Paris 06, CNRS, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, CS, Roscoff, France.ORCID http://orcid.org/0000-0002-7483-2841
Tristan BarbeyronSorbonne Université, Univ Paris 06, CNRS, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, CS, Roscoff, France.
Edwin A YatesDepartment of Biochemistry and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Eric C MartensDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA.
Alan CartmellDepartment of Biochemistry and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK. Alan.Cartmell@liverpool.ac.uk.ORCID http://orcid.org/0000-0002-5512-249X
University of Liverpool · GBCentre National de la Recherche Scientifique · FRUniversity of Gothenburg · SEUniversity of Michigan · USOsloMet – Oslo Metropolitan University · NOUniversity of Newcastle Australia · AU

Funding

Low dietary fiber and gut microbiota-induced mucus layer erosion as IBD triggersR01DK118024 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GRACE Y. CHEN, Eric C Martens · 2018 to 2026
$4.9M
The MUC2 Mucus Gel as an Innate Immune Mechanism that Inhibits InflammationU01AI095473 · NIAID · GOTEBORG UNIVERSITY · PI HANSSON, GUNNAR C., JOHANSSON, MALIN E.V. · 2011 to 2020
$2.6M
Unraveling the enzymatic pathway of gut bacterial mucus degradation to treat inflammationR01DK125445 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KOROPATKIN, NICOLE M, MARTENS, ERIC C · 2020 to 2023
$2.2M
Biotechnology and Biological Sciences Research Council BB/S506746/1European Research Council 694181Motor Neurone Disease Association WRIGHT/OCT18/969-799NIAID NIH HHS U01 AI095473NIDDK NIH HHS R01 DK118024NIDDK NIH HHS R01 DK125445Wellcome Trust
6 · The paper itself

Abstract

Sulfated glycans are ubiquitous nutrient sources for microbial communities that have coevolved with eukaryotic hosts. Bacteria metabolize sulfated glycans by deploying carbohydrate sulfatases that remove sulfate esters. Despite the biological importance of sulfatases, the mechanisms underlying their ability to recognize their glycan substrate remain poorly understood. Here, we use structural biology to determine how sulfatases from the human gut microbiota recognize sulfated glycans. We reveal seven new carbohydrate sulfatase structures spanning four S1 sulfatase subfamilies. Structures of S1_16 and S1_46 represent novel structures of these subfamilies. Structures of S1_11 and S1_15 demonstrate how non-conserved regions of the protein drive specificity toward related but distinct glycan targets. Collectively, these data reveal that carbohydrate sulfatases are highly selective for the glycan component of their substrate. These data provide new approaches for probing sulfated glycan metabolism while revealing the roles carbohydrate sulfatases play in host glycan catabolism.

Indexed as

Gastrointestinal MicrobiomeSulfatasesBacteriaHumansPolysaccharidesSulfatesPolysaccharidesSulfatasesSulfates

Identifiers

PMID35710619
PMCPMC7613211
OpenAlexW4282964113

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.