Evidence map›Paper›PMID 35710351›Full record

ArticleBMC genomics2022

The extensive transgenerational transcriptomic effects of ocean acidification on the olfactory epithelium of a marine fish are associated with a better viral resistance.

Mishal Cohen-Rengifo, Morgane Danion, Anne-Alicia Gonzalez, Marie-Laure Bégout, Alexandre Cormier, Cyril Noël, Joëlle Cabon, Thomas Vitré, Felix C Mark, David Mazurais

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Tolerance to future elevated COJournal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Mishal Cohen-RengifoIFREMER, PFOM-ARN, 29280, Plouzané, France. mishal.cohen.r@gmail.com.
Morgane DanionPloufragan-Plouzané Laboratory, Fish Viral Pathology Unit, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), Technopôle Brest-Iroise, 29280, Plouzané, France.
Anne-Alicia GonzalezMGX, CNRS, INSERM, University of Montpellier, Biocampus Montpellier, Montpellier, France.
Marie-Laure BégoutMARBEC, University of Montpellier, CNRS, IFREMER, 34250, Palavas-les-Flots, IRD, France.
Alexandre CormierIFREMER, SEBIMER, 29280, Plouzané, France.
Cyril NoëlIFREMER, SEBIMER, 29280, Plouzané, France.
Joëlle CabonPloufragan-Plouzané Laboratory, Fish Viral Pathology Unit, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), Technopôle Brest-Iroise, 29280, Plouzané, France.
Thomas VitréIFREMER, PFOM-ARN, 29280, Plouzané, France.
Felix C MarkAlfred Wegener Institute Helmholtz Centre for Polar and Marine Research (AWI), Department of Integrative Ecophysiology, 27570, Bremerhaven, Germany.
David MazuraisIFREMER, PFOM-ARN, 29280, Plouzané, France.
Ifremer · FRCEA Paris-Saclay · FRAlfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung · DEInstitut de Recherche pour le Développement · FRLaboratoire des Sciences de l'Environnement Marin · FRUniversité de Montpellier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProgressive CO

resultsWe discovered transcriptomic trade-offs in both sensory and immune systems after long-term transgenerational exposure to OA. Specifically, RNA-Seq analysis of the olfactory rosette, the peripheral olfactory organ, from 18-months-old F2 revealed extensive regulation in genes involved in ion transport and neuronal signalling, including GABAergic signalling. We also detected OA-induced up-regulation of genes associated with odour transduction, synaptic plasticity, neuron excitability and wiring and down-regulation of genes involved in energy metabolism. Furthermore, OA-exposure induced up-regulation of genes involved in innate antiviral immunity (pathogen recognition receptors and interferon-stimulated genes) in combination with down-regulation of the protein biosynthetic machinery. Consistently, OA-exposed F2 challenged with betanodavirus, which causes damage to the nervous system of marine fish, had acquired improved resistance.

conclusionF2 exposed to long-term transgenerational OA acclimation showed superior viral resistance, though as their metabolic and odour transduction programs were altered, odour-mediated behaviours might be consequently impacted. Although it is difficult to unveil how long-term OA impacts propagated between generations, our results reveal that, across generations, trade-offs in plastic responses is a core feature of the olfactory epithelium transcriptome in OA-exposed F2 offspring, and will have important consequences for how cultured and wild fish interacts with its environment.

Indexed as

BassTranscriptomeAnimalsCarbon DioxideHomeostasisHydrogen-Ion ConcentrationOceans and SeasOlfactory MucosaSeawaterCarbon DioxideAnti-viral immunityBetanodavirusClimate changeEuropean sea bassLong-term transgenerational ocean acidificationMetabolismNeuro-sensory systemOlfactory epitheliumTranscriptomics

Identifiers

PMID35710351
PMCPMC9204966
OpenAlexW4283012632

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.