Evidence map›Paper›PMID 35710250›Full record

Observational studyBMJ open2022

Optimising Xpert-Ultra and culture testing to reliably measure tuberculosis prevalence in the community: findings from surveys in Zambia and South Africa.

Sian Floyd, Eveline Klinkenberg, Petra de Haas, Barry Kosloff, Thomas Gachie, Pete J Dodd, Maria Ruperez, Chali Wapamesa, Michael J Burnett, Nico Kalisvaart and 9 more

Registry-linked trialOpen access · goldAbstract readMulticenter StudyObservational Study
In one paragraph

Observational study in BMJ open, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03739736 (Tuberculosis Reduction Through Expanded Anti-retroviral Therapy and Screening of Active TB Project), which is not on this map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03739736 unknown statusnot on this map

Tuberculosis Reduction Through Expanded Anti-retroviral Therapy and Screening of Active TB Project

TypeobservationalSponsorLondon School of Hygiene and Tropical MedicineRan2018 to 2021Enrolled4,200ConditionsTuberculosis, HIV/AIDSArmsCombination of TB/HIV prevention activities (arm A), Combination of TB/HIV prevention activities (arm B), Standard of care (arm C)
3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Diagnostic accuracy of Xpert MTB/RIF Ultra for detecting pulmonary tuberculosis and rifampicin resistance: a systematic review and meta-analysis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Pooled it
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  3. Prevalence and Predictors of Tuberculosis in Adults and Adolescents With Sputum Trace Ultra Results in 2 High-Burden Clinical Settings.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2026
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  16. Evidence for Tuberculosis in Individuals With Xpert Ultra "Trace" Sputum During Screening of High-Burden Communities.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 4 countries.

Sian Floyd *London School of Hygiene & Tropical Medicine, London, UK sian.floyd@lshtm.ac.uk.ORCID 0000-0002-8615-7601
Eveline Klinkenberg *KNCV Tuberculosis Foundation, Den Haag, The Netherlands.
Petra de HaasKNCV Tuberculosis Foundation, Den Haag, The Netherlands.
Barry KosloffLondon School of Hygiene & Tropical Medicine, London, UK.
Thomas GachieLondon School of Hygiene & Tropical Medicine, London, UK.
Pete J DoddSchool of Health and Related Research, The University of Sheffield, Sheffield, UK.
Maria RuperezLondon School of Hygiene & Tropical Medicine, London, UK.
Chali WapamesaZambart, University of Zambia School of Medicine, Lusaka, Zambia.
Michael J BurnettHealth Systems Trust, Cape Town, South Africa.
Nico KalisvaartKNCV Tuberculosis Foundation, Den Haag, The Netherlands.
Redwaan VermaakHealth Systems Trust, Cape Town, South Africa.
Tila MaingaZambart, University of Zambia School of Medicine, Lusaka, Zambia.
Albertus SchaapLondon School of Hygiene & Tropical Medicine, London, UK.
Sarah FidlerHIV Clinical Trials Unit, Imperial College London, London, UK.
Linda MureithiHealth Systems Trust, Cape Town, South Africa.
Kwame ShanaubeZambart, University of Zambia School of Medicine, Lusaka, Zambia.
Richard HayesLondon School of Hygiene & Tropical Medicine, London, UK.
Helen AylesLondon School of Hygiene & Tropical Medicine, London, UK.
TREATS study team
University of Zambia · ZMHealth Systems Trust · ZALondon School of Hygiene & Tropical Medicine · GBTuBerculosis Vaccine Initiative · NLImperial College London · GBUniversity of Sheffield · GB

Funding

Medical Research Council MR/P022081/1Medical Research Council MR/R010161/1
6 · The paper itself

Abstract

objectivesPrevalence surveys remain the best way to assess the national tuberculosis (TB) burden in many countries. Challenges with using culture (the reference standard) for TB diagnosis in prevalence surveys have led to increasing use of molecular tests (Xpert assays), but discordance between these two tests has created problems for deciding which individuals have TB. We aimed to design an accurate diagnostic algorithm for TB prevalence surveys (TBPS) that limits the use of culture.

designTBPS in four communities, conducted during 2019.

settingThree Zambian communities and one South-African community included in the TBPS of the Tuberculosis Reduction through Expanded Anti-retroviral Treatment and Screening study.

participantsRandomly sampled individuals aged ≥15 years. Among those who screened positive on chest X-ray or symptoms, two sputum samples were collected for field Xpert-Ultra testing and a third for laboratory liquid-culture testing. Clinicians reviewed screening and test results; in Zambia, participants with OUTCOMES: Culture and Xpert-Ultra test results.

resultsAmong 946 culture-negative individuals, 917 were Xpert-negative, 12 Xpert-trace-positive and 17 Xpert-positive (grade very low, low, medium or high), with Xpert categorised as the highest grade of the two sample results. Among 63 culture-positive individuals, 8 were Xpert-negative, 9 Xpert-trace-positive and 46 Xpert-positive. Counting trace-positive results as positive, the sensitivity of Xpert-Ultra compared with culture was 87% (95% CI 76% to 94%) using two samples compared with 76% (95% CI 64% to 86%) using one. Specificity was 97% when trace-positive results were counted as positive and 98% when trace-positive results were counted as negative. Most Xpert-Ultra-positive/culture-negative discordance was among individuals whose Xpert-positive results were trace-positive or very low grade or they reported previous TB treatment. Among individuals with both Xpert-Ultra results grade low or above, the positive-predictive-value was 90% (27/30); 3/30 were plausibly false-negative culture results.

conclusionUsing Xpert-Ultra as the primary diagnostic test in TBPS, with culture only for confirmatory testing, would identify a high proportion of TB cases while massively reducing survey culture requirements. TRIAL REGISTRATION NUMBER: NCT03739736.

Indexed as

Mycobacterium tuberculosisTuberculosisTuberculosis, PulmonaryHumansPrevalenceSensitivity and SpecificitySouth AfricaSputumZambiaMolecular diagnosticsPublic healthTuberculosis

Identifiers

PMID35710250
PMCPMC9207894
OpenAlexW4282982145

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.