Evidence map›Paper›PMID 35710139›Full record

ArticleGenes & development2022

Recurrent chromosomal translocations in sarcomas create a megacomplex that mislocalizes NuA4/TIP60 to Polycomb target loci.

Deepthi Sudarshan, Nikita Avvakumov, Marie-Eve Lalonde, Nader Alerasool, Charles Joly-Beauparlant, Karine Jacquet, Amel Mameri, Jean-Philippe Lambert, Justine Rousseau, Catherine Lachance and 12 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. BAF complex-independent gene activation by SS18::SSX.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. BRD8 Guards the Pluripotent State by Sensing and Maintaining Histone Acetylation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Know when to fold 'em: Polycomb complexes in oncogenic 3D genome regulation.Frontiers in cell and developmental biology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 7 institutions in 1 country.

Deepthi SudarshanCentre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Nikita Avvakumov *Centre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Marie-Eve Lalonde *Centre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Nader Alerasool *Donnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 3E1, Canada.
Charles Joly-Beauparlant *Computational Biology Laboratory, CHU de Québec-Université Laval Research Center, Québec City, Québec G1V 4G2, Canada.
Karine Jacquet *Centre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Amel Mameri *Centre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Jean-Philippe LambertCentre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Justine RousseauInstitut de Recherches Cliniques de Montréal, Department of Biochemistry and Molecular Medicine, Université de Montréal, Montréal, Québec H3T 1J4, Canada.
Catherine LachanceCentre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Eric PaquetCentre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Lara HerrmannComputational Biology Laboratory, CHU de Québec-Université Laval Research Center, Québec City, Québec G1V 4G2, Canada.
Samarth Thonta SettyComputational Biology Laboratory, CHU de Québec-Université Laval Research Center, Québec City, Québec G1V 4G2, Canada.
Jeremy LoehrCentre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Marcus Q BernardiniDepartment of Gynecologic Oncology, Princess Margaret Cancer Center, University Health Network, Sinai Health System, Toronto, Ontario M5B 2M9, Canada.
Marjan RouzbahmanDepartment of Laboratory Medicine and Pathobiology, Princess Margaret Hospital Cancer Centre, Toronto, Ontario M5G 2C4, Canada.
Anne-Claude GingrasCentre for Systems Biology, Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada.
Benoit CoulombeInstitut de Recherches Cliniques de Montréal, Department of Biochemistry and Molecular Medicine, Université de Montréal, Montréal, Québec H3T 1J4, Canada.ORCID 0000-0003-1702-0692
Arnaud DroitComputational Biology Laboratory, CHU de Québec-Université Laval Research Center, Québec City, Québec G1V 4G2, Canada.
Mikko TaipaleDonnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 3E1, Canada.
Yannick DoyonCentre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Jacques CôtéCentre Hospitalier Universitaire (CHU) de Québec-Université Laval Research Center, Laval University Cancer Research Center, Québec City, Québec G1R 3S3, Canada.
Centre hospitalier universitaire de Québec · CAUniversité Laval · CAMontreal Clinical Research Institute · CAMount Sinai Hospital · CAUniversity of Toronto · CAPrincess Margaret Cancer Centre · CAUniversity Health Network · CA

Funding

CIHR FDN-143314
6 · The paper itself

Abstract

Chromosomal translocations frequently promote carcinogenesis by producing gain-of-function fusion proteins. Recent studies have identified highly recurrent chromosomal translocations in patients with endometrial stromal sarcomas (ESSs) and ossifying fibromyxoid tumors (OFMTs), leading to an in-frame fusion of PHF1 (PCL1) to six different subunits of the NuA4/TIP60 complex. While NuA4/TIP60 is a coactivator that acetylates chromatin and loads the H2A.Z histone variant, PHF1 is part of the Polycomb repressive complex 2 (PRC2) linked to transcriptional repression of key developmental genes through methylation of histone H3 on lysine 27. In this study, we characterize the fusion protein produced by the

Indexed as

Endometrial NeoplasmsSarcomaSarcoma, Endometrial StromalChromatinDNA-Binding ProteinsFemaleHistonesHumansPolycomb-Group ProteinsPolycomb Repressive Complex 2Translocation, GeneticChromatinDNA-Binding ProteinsHistonesPolycomb-Group ProteinsPolycomb Repressive Complex 2EPC1H3K27 methylationH4 acetylationHOXDJAZF1NuA4PHF1PRC2SUZ12TIP60

Identifiers

PMID35710139
PMCPMC9296003
OpenAlexW4283010046

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.