Evidence map›Paper›PMID 35709954›Full record

ReviewJournal of experimental botany2022

The Arabidopsis thaliana-Fusarium oxysporum strain 5176 pathosystem: an overview.

Liu Wang, Jacob Calabria, Hsiang-Wen Chen, Marc Somssich

Open access · hybridAbstract readReview
In one paragraph

Review in Journal of experimental botany, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. The endophyteFrontiers in microbiology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Life (Basel, Switzerland) · 2025
    Article
  8. Review
  9. Article
  10. Article
  11. Characterization ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  12. Article
  13. Plants (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Liu WangSchool of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia.
Jacob CalabriaSchool of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia.
Hsiang-Wen ChenSchool of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia.
Marc SomssichSchool of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia.ORCID 0000-0001-5092-6168
The University of Melbourne · AU

Funding

Australian Research Council DE200101560China Scholarship CouncilGraduate Research Scholarship
6 · The paper itself

Abstract

Fusarium oxysporum is a soil-borne fungal pathogen of several major food crops. Research on understanding the molecular details of fungal infection and the plant's defense mechanisms against this pathogen has long focused mainly on the tomato-infecting F. oxysporum strains and their specific host plant. However, in recent years, the Arabidopsis thaliana-Fusarium oxysporum strain 5176 (Fo5176) pathosystem has additionally been established to study this plant-pathogen interaction with all the molecular biology, genetic, and genomic tools available for the A. thaliana model system. Work on this system has since produced several new insights, especially with regards to the role of phytohormones involved in the plant's defense response, and the receptor proteins and peptide ligands involved in pathogen detection. Furthermore, work with the pathogenic strain Fo5176 and the related endophytic strain Fo47 has demonstrated the suitability of this system for comparative studies of the plant's specific responses to general microbe- or pathogen-associated molecular patterns. In this review, we highlight the advantages of this specific pathosystem, summarize the advances made in studying the molecular details of this plant-fungus interaction, and point out open questions that remain to be answered.

Indexed as

ArabidopsisFusariumLigandsPathogen-Associated Molecular Pattern MoleculesPlant DiseasesPlant Growth RegulatorsSoilLigandsPathogen-Associated Molecular Pattern MoleculesPlant Growth RegulatorsSoilArabidopsis thalianaFo5176fungal pathogenFusarium oxysporumimmunityplant–microbe interactionsvascular wilt

Identifiers

PMID35709954
PMCPMC9578349
OpenAlexW4283020801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.